Gene Information

Name : Marky_1228 (Marky_1228)
Accession : YP_004368078.1
Strain : Marinithermus hydrothermalis DSM 14884
Genome accession: NC_015387
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1215485 - 1216366 bp
Length : 882 bp
Strand : -
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; HAMAP: Vitamin B6 biosynthesis protein; InterPro IPR001852; KEGG: ttj:TTHA0704 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; TIGRFAM: Vitami

DNA sequence : 
ATGGAAAAAGGAACGCTGCGCGTCAAGACCGGTTTCGCCGAGATGTTCAAGGGCGGGGTGATCATGGACGTGACCACCCC
GGAGCAGGCCGTGATCGCCGAGGAGGCCGGGGCCTGCGCGGTCATGGCCCTCGAGCGGGTGCCCGCGGACATACGCGCCC
AAGGCGGCGTGGCCCGCATGTCGGACCCCAAGATCATCAAGGAGATCATGGCCGCGGTCTCCATCCCCGTGATGGCCAAA
GTGCGGATCGGGCACTTCGTCGAAGCCATGATCCTCGAGGCGATCGGCGTGGACTTCATCGACGAGTCCGAGGTGCTGAC
CCCGGCGGACGACGAGCACCACATCGACAAGTGGAGCTTCAAGGTGCCGTTCGTGTGCGGCGCGCGGGACCTGGGCGAGG
CGCTGCGCCGCATCGGTGAGGGCGCCGCGATGATCCGCACCAAGGGCGAGGCCGGCACCGGGAACGTGATCGAGGCCGTG
CGCCACGCCCGCACCATGATGAAGCAGATCCGTCACGTGCAGAGCCTGCGGCCGGACGAGCTGATGGCCTACGCGAAGGA
GATCCAAGCGCCTTACGAGCTCGTGAAGTACGTGCACGAGCACGGCCGGCTCCCGGTCGTGAACTTCGCCGCGGGGGGCG
TGGCCACGCCGGCGGACGCGGCCCTCATGATGCACCTGGGCATGGACGGCGTCTTCGTCGGCTCCGGGATCTTCAAGTCC
GGGGACCCCAAGAAGCGCGCTCGGGCGATCGTGCGTGCGGTCACGCACTACAACGACCCCGAGGTCCTCGCGGAGGTAAG
CGAGGACCTGGGCGAACCGATGGTGGGCATCAACCTGGACACCCTCCGTGAGGAGGAACGCCTGGCCAAACGCGGCTGGT
AA

Protein sequence : 
MEKGTLRVKTGFAEMFKGGVIMDVTTPEQAVIAEEAGACAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAK
VRIGHFVEAMILEAIGVDFIDESEVLTPADDEHHIDKWSFKVPFVCGARDLGEALRRIGEGAAMIRTKGEAGTGNVIEAV
RHARTMMKQIRHVQSLRPDELMAYAKEIQAPYELVKYVHEHGRLPVVNFAAGGVATPADAALMMHLGMDGVFVGSGIFKS
GDPKKRARAIVRAVTHYNDPEVLAEVSEDLGEPMVGINLDTLREEERLAKRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-87 70
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-87 70
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-87 70