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Name : Marky_1108 (Marky_1108) Accession : YP_004367960.1 Strain : Marinithermus hydrothermalis DSM 14884 Genome accession: NC_015387 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1087041 - 1088540 bp Length : 1500 bp Strand : + Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR002313:IPR004365:IPR004364; KEGG: opr:Ocepr_1046 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, t DNA sequence : ATGCCGGAGTGGAGTGAGCAGACCCAGCAGCGCTTGCGGAACCTGGAAGCCCTAAAGGAGGCGGGGTACGAGGCGTACCC CTACCGCTACCCCAAGACCCACGACGCCGCGCAGATCCTCGAGGCCCACGCGGGCGCCGGTCCTGGGGAGGAGTGGCCGG AGGTGGTGCGGCTCGCGGGCCGGCTCGTGGCCCTGCGCCGCATGGGCAAGGTGACGTTCGCGCACCTTCTGGACGGCTCC GGGCGGATTCAGCTGTACTTCAACAAGCAGGAGACCCCGGACTACAACCTCCTGAAGAAGCTGGACATCGGGGATATCAT TGGCGTGGAGGGTACGGTCTTCACCACGAAGACCGGAGAGATCACGGTGCGGGTCACGCGCTGGACGCTGCTCGTGAAAA GCCTCCGCCCCTTGCCGGACAAGTGGCACGGCATCCGCGACAAGGAGGTGCGTTACCGCCAGCGCTACCTCGACCTCATC GTGAACCCCGAGGTGCGCGAGGTCTTCAAGAAACGCGCGCAGATCGTGCGTTTCGTGCGGCGGTTCCTCGAGGACCGCGG GTTCCTCGAGGTGGAAACCCCGGTGATCGTGCCTACCGCCGGCGGGACCGAGGCGCGCCCCTTCCGCACCTACCACAACG CGCTCGGAACCGAGTTCGAGCTGCGCATCGCCCTCGAGCTGCCCCTCAAGCGCCTCCTGGTCGGCGGGTTCGAGAAGGTC TTCGAGATCGGCCGGGTTTTCCGTAACGAAGGCATCGACGCCCAGCACAACCCCGAGTTCACCATGCTCGAGCTGTACTG GGCCTACGCCGACTACAACGACGTGGCCCAGCTCGTCGAGGACCTCCTCTCCAGCCTCGCCAAGGCCATCCACGGCTCGT ACACGGTGCCCTACCAAGGGCGCGAGATCGACTTCACCCCGCCGTTTAAGCGCATCTCCTTCGTGGAGACCCTAAAGGAA CGGGCCGGCCTGGATTTTGATCCGCTCGACCTCGAGCAGCTCCAGCGCTGGGCGCGGGCCAAGCACCCGGAGTTCGCGGA CGTGCCGAGCTACAAGCTGCTCGACAAGCTCTTCGAGCACTACGTGGAGGCCGAGCTCTGGAACCCCACCTTCGTCTACG ACTTCCCCCTCGCTATCAGCCCGCTCGCCAAGAAGCACCGGGAGAAACCCGGCCTCACCGAGCGGTGGGACCTGTTCGTC GCGGGCCTCGAGCTCGCCCCCGCGTACTCCGAGCTGAACGACCCCCTGGACCAGCGAGCGCGCTTCGAGGAGCAGGCTCG GCGGCGCGAGGCAGGCGACGAGGAAGCGCACGGGTACGACGAGGACTTCCTCGTGGCCCTCGAGCACGCCATGCCTCCGG CGGGCGGGCTGGGCATCGGGATCGACCGCCTCACCATGATCCTCACCGACATGCCCTCCATCCGCGACGTGATTCTCTTC CCGCTCCTTAAGCCCCGCAGGCCAGGGGAAGCGGAGCCGGTCTCGGAAGAGGAGGCGTAA Protein sequence : MPEWSEQTQQRLRNLEALKEAGYEAYPYRYPKTHDAAQILEAHAGAGPGEEWPEVVRLAGRLVALRRMGKVTFAHLLDGS GRIQLYFNKQETPDYNLLKKLDIGDIIGVEGTVFTTKTGEITVRVTRWTLLVKSLRPLPDKWHGIRDKEVRYRQRYLDLI VNPEVREVFKKRAQIVRFVRRFLEDRGFLEVETPVIVPTAGGTEARPFRTYHNALGTEFELRIALELPLKRLLVGGFEKV FEIGRVFRNEGIDAQHNPEFTMLELYWAYADYNDVAQLVEDLLSSLAKAIHGSYTVPYQGREIDFTPPFKRISFVETLKE RAGLDFDPLDLEQLQRWARAKHPEFADVPSYKLLDKLFEHYVEAELWNPTFVYDFPLAISPLAKKHREKPGLTERWDLFV AGLELAPAYSELNDPLDQRARFEEQARRREAGDEEAHGYDEDFLVALEHAMPPAGGLGIGIDRLTMILTDMPSIRDVILF PLLKPRRPGEAEPVSEEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-86 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-71 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Marky_1108 | YP_004367960.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-86 | 47 |
