Gene Information

Name : Tresu_0513 (Tresu_0513)
Accession : YP_004364758.1
Strain : Treponema succinifaciens DSM 2489
Genome accession: NC_015385
Putative virulence/resistance : Unknown
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 571830 - 573374 bp
Length : 1545 bp
Strand : +
Note : COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR004546; KEGG: cst:CLOST_1970 type I restriction modification system protein hsdmi; PFAM: DNA methylase, adenine-specific; SPTR: Putative uncharacterized

DNA sequence :
ATGTCCGGCATACAGCAAAGAGCGGAGCTGCAGGCTCAAATCTGGAAAATAGCGAATGAAGTCCGGGGAGCAGTTGACGG
ATGGGATTTTAAACAGTTCGTTTTAGGAACGCTTTTCTATCGTTTTATCAGCGAGAATTTTTGTGCATATATAGAGGCTG
ACGATGAAAGCATTGTGTATGCAAGCCTTGAAGATTCAATAATCACTCCGGAAATAAAGGACGATGCGATAAAGACAAAA
GGATACTTTATCTATCCTAGCCAGCTTTTTGTGAACATTGCGAAAAATGCGAATGACAATGAATCTTTGAACACAGATCT
GGCGGAGATTTTTTCTGAAATTGAAAAATCCGCGACAGGCTACGATTCCGAGCAGGATATAAAAGGGCTTTTTGCTGATT
TCGACACGACAAGCAACAGGTTGGGAAACACGGTAAAAGAAAAAAACTCCAGGCTTGCAGCGGTTATAAACGGAGTTTCT
GGACTGAATTTTGGAAATTTCCACGACAATCAGATTGACCTTTTTGGCGACGCCTACGAATTTTTGATTTCAAACTACGC
GGCAAATGCAGGAAAATCGGGCGGAGAATTTTTTACTCCTCAGAATGTCTCAAAACTTATCGCGCGCCTTGCAATGCACA
AGCAGGAAAACGTGAACAAGATTTACGACCCTGCGTGCGGTTCAGGCTCGCTCCTCTTGCAGGCGAAAAAGCAGTTCGAG
GAAAACAAAATAGAAGACGGCTTTTTCGGGCAGGAAATCAACCATACAACATACAACCTTGCAAGAATGAATATGTTCCT
GCACAACATAAATTACGATAAATTCAACATAAAACTCGGAGACACGCTCACAAATCCGCAGTTCAAGGACGACAAGCCTT
TTGATGCGATTGTCTCGAATCCGCCGTATTCAATCAACTGGATTGGAAGCGACGACCCCACATTGATAAACGACGATCGC
TTTGCTCCGGCAGGAGTCCTGGCTCCAAAGTCAAAGGCGGATTTTGCGTTCATTCTTCATTCGCTAAATTATCTTTCAAG
CAAAGGCCGGGCTGCGATTGTCTGCTTCCCTGGAATTTTCTACCGAGGTGGCGCAGAACAGAAAATCAGAAAATACCTTG
TAGACAACAACTATGTGGAAACTGTAATTTCACTTGCGCCGAATCTTTTTTACGGAACTTCAATCGCTGTAAATATTTTA
GTTCTTTCAAAGCACAAGGAAGACACAAAAATCCAGTTTATAGAAGCCGGCGAGCTTTATCAAAAAGAAACAAACAACAA
TATTCTTACAGATGAGCATATAGAAAAAATCATAGAAGCGTTTGACTCAAAAAATGACATTCAATATTTTGCAAAGTCCG
CAGAATTAGAAGAAATTGCAAAAAACGACTACAACCTTTCCGTTTCAAGTTATGTCGAGGCCAAAGACACACGCGAAAAA
ATCGACATCATGGAACTGAACGCAAAAATCAGGGAAATCGTAGCAAGAGAAAACGTTCTCCGCGCCGAAATTGACAAGAT
TGTTGATGAGATTGAGGGAGAATAA

Protein sequence :
MSGIQQRAELQAQIWKIANEVRGAVDGWDFKQFVLGTLFYRFISENFCAYIEADDESIVYASLEDSIITPEIKDDAIKTK
GYFIYPSQLFVNIAKNANDNESLNTDLAEIFSEIEKSATGYDSEQDIKGLFADFDTTSNRLGNTVKEKNSRLAAVINGVS
GLNFGNFHDNQIDLFGDAYEFLISNYAANAGKSGGEFFTPQNVSKLIARLAMHKQENVNKIYDPACGSGSLLLQAKKQFE
ENKIEDGFFGQEINHTTYNLARMNMFLHNINYDKFNIKLGDTLTNPQFKDDKPFDAIVSNPPYSINWIGSDDPTLINDDR
FAPAGVLAPKSKADFAFILHSLNYLSSKGRAAIVCFPGIFYRGGAEQKIRKYLVDNNYVETVISLAPNLFYGTSIAVNIL
VLSKHKEDTKIQFIEAGELYQKETNNNILTDEHIEKIIEAFDSKNDIQYFAKSAELEEIAKNDYNLSVSSYVEAKDTREK
IDIMELNAKIREIVARENVLRAEIDKIVDEIEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 3e-99 44
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 8e-99 44
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 7e-99 44
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 4e-99 44
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 2e-99 44
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-99 44
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 3e-99 44
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 2e-98 44
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 2e-99 44
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 3e-99 44
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 2e-98 44
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 2e-99 44
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 3e-99 44
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 1e-98 44
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 3e-99 44
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 1e-98 44
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 3e-99 44
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 3e-99 44
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 3e-99 44
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 2e-97 43
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-97 43
ORF6 BAC22943.1 - Not tested etd PI Protein 9e-99 43