Gene Information

Name : Tresu_0036 (Tresu_0036)
Accession : YP_004364303.1
Strain : Treponema succinifaciens DSM 2489
Genome accession: NC_015385
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 39026 - 39904 bp
Length : 879 bp
Strand : +
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; HAMAP: Vitamin B6 biosynthesis protein; InterPro IPR001852; KEGG: ere:EUBREC_2951 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; TIGRFAM: Vit

DNA sequence : 
ATGGAATCAGGAAAACAGTATGAATTGAATAAAAATCTTGCCCAGATGCTTAAAGGCAGCGTGATTATGGACGTTACAAC
TCCAGAGCAGGCAAAAATTGCGGAAGAAGCGGGAGCTTGCGCAGTAATGGCTCTTGAGAGGATTCCGGCGGACATAAGAG
CTGCTGGCGGCGTTTCCAGAATGAGCGATCCAAAAATGATAAAAGGAATTCAGGAAGCGGTTTCAATTCCTGTAATGGCA
AAGTGCCGCATCGGGCATTTTGTGGAAGCACAGATTTTGGAAGCAATTGAAATTGACTATATAGATGAAAGTGAAGTTCT
TTCTCCAGCTGATGATGTTTATCATATCAACAAAAAGAATTTTAAAGTTCCGTTTGTATGCGGTGCAAAAGATTTGGGCG
AAGCATTAAGAAGAATCAGCGAAGGCGCATCAATGATTAGAACAAAAGGTGAGCCGGGAACTGGAGATATAATTCAGGCT
GTCCGCCACATGAGAAAAATGAATTCTGAAATTTCAAGAATTGTTTCTATGCGTGAAGACGAGCTTTATGAAGAGGCGAA
AACCCTTCAGGTTTCCTACGAGCTTGTAAAGTTTGTGCATGAAAACAAAAGGCTCCCTGTTGTTAATTTTGCAGCGGGTG
GCGTTGCGACTCCTGCTGATGCGGCTCTTATGATGCAGCTTGGCGCGGAAGGAGTTTTTGTAGGTTCTGGAATTTTCAAG
TCAGGAAATCCAAAGAAAAGAGCGGCTTCAATTGTAAAGGCTGTTACAAATTTCAATGACGCAAAGCTTATTGCCCAGCT
TTCAGAAGATTTGGGTGAAGCTATGGTTGGAATCAATGAAAGTGAAATCGCCATTCTTATGGCAGAGCGCGGAAAATGA

Protein sequence : 
MESGKQYELNKNLAQMLKGSVIMDVTTPEQAKIAEEAGACAVMALERIPADIRAAGGVSRMSDPKMIKGIQEAVSIPVMA
KCRIGHFVEAQILEAIEIDYIDESEVLSPADDVYHINKKNFKVPFVCGAKDLGEALRRISEGASMIRTKGEPGTGDIIQA
VRHMRKMNSEISRIVSMREDELYEEAKTLQVSYELVKFVHENKRLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFK
SGNPKKRAASIVKAVTNFNDAKLIAQLSEDLGEAMVGINESEIAILMAERGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-85 69
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-85 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-85 68