Gene Information

Name : Tresu_2117 (Tresu_2117)
Accession : YP_004366283.1
Strain : Treponema succinifaciens DSM 2489
Genome accession: NC_015385
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2264108 - 2266675 bp
Length : 2568 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: ssm:Spirs_1928 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; UvrB/Uv

DNA sequence :
ATGTACGAAAATTTTTCTCCTAGGGCACAGCGAATTTTGGTTGCGCTTGCTCAAGATGAAGCTTATTTTTTAGGAAGCCG
GCAGATTGATCCGGAACATATTATACTTGCGCTTTTAAAATCTGCGGAAGGACTTGGATACGTTGTGCTTCAGCAGCTTA
GAATAAATGTTCTTACTCTTCAGCTTGCGATTGAACAAAGCTTGCCTTCTCGTTTTCCAGATACTGAATTAAAGACGATT
CCAAATTCTGATCGCACAGAACGTTTTTTAAATCAAGCGGCATTCGATGCAAAAACAATGCAATGCAACTATGTTGGAAC
CGAGCATCTTTTGTTTGCCGCGGCTACAGAGGAGCGTTCCCTTTTGTGGGCATATTTAAAGCGCGCAGGGATTTCTATTG
AGCAAGTGAAAAAAACGATTGCGGATATTCAGCGGAAAATTCCTTCTTCTGCTGTAAAAGATCCAAGAAATTTTTCAGGC
GGAAATTTTGCGCAGGAAACTCCAGTTCCTTTTATGGCGGACGGAAGCGTACAAAGAAAACAAAAGCAGTCTGGAATTCT
TGCACAGTTTTCAAGAGACTTGACGCAAGATGCAAAGGACGGAAACTTAGATCCTGTTGTTGGTCGTGAAAAAGAAGTTT
TACGCACAATTCAGATTTTAAGCCGCCGCACAAAAAATAATCCGGTTCTTGTTGGAGAGCCGGGCGTTGGAAAAACTGCA
ATAGCAGAGTCTCTTGCACAGCGCATTGCAAATGGAAATGTTCCTGCTAATCTTTTTGGAAAAAAAATTCTTCAGCTTGA
TTTGGCTGCAATGATTGCCGGAACAAAATATCGCGGCGAATTTGAAGAGCGGCTTAAGCGTGTAATGAAAGAAATCAAGG
AATCAAAAAATATTATTCTTTTTGTTGATGAGCTTCATACTATAATTGGTGCTGGAGGACCAGAAGGTTCAATGGATGCA
AGCAACATGATAAAGCCTGCTCTAAGCCGCGGTGAGCTTCAGATGATTGGAGCGACTACGACGAAGGAATACCGAAAATA
TTTTGAGAAAGATTCCGCGCTTGCAAGAAGATTTCAGACTGTAAAAGTTGAAGAGCCTTCCGAATATGAAACGCAAGAAA
TACTTTTGGGACTGAAAAAATATTATGAGGAATTTCACCATGTTATTTATGAAGATGATGTGATTCCGATTATTGTAAAA
TATAGCAAGCGATATATTTCTGAACGATTTTTGCCAGACAAAGCAATTGATATTCTTGATGAAGCCGGAGCTGCGAAAAA
AATGCAGGAAGATGTTCGTCCGGAGGAATTGGATAAGCTTGAATCAGAGTATGCAAGATATAATGAGCAGAAACGTGAGC
TTGTTGCTTCCCAAGAATATGAAAAAGCTGCGTATATCAGAGACCACATAAATTTGCTGCGCTCAAGAATAGATGATTTA
AACCGCAAATGGAAATCTTCTGACGCCGCAAAAAAACGCCGTGTCTGCGCGGAAGATGTCTGCAAGATTATAAGTGAGAT
TTCCGGAATCGATGTTTCAAAATTGGATGAAGGAAAATCTGGCCGGCTTTTGAATATGGAAAAAATTCTGCACGAAGAAG
TTGTGGGACAGGACGAAGCCGTTGCCTCGATTTGTAGCGCAGTCCGCAGAAGCAAAGCCGGCATTTCTTCGCATAAACGT
CCTGTAGGTTCTTTTATTTTTCTTGGTCCTACTGGCGTTGGAAAAACTCAGCTTGCAAAGTCGCTTGCAAAATTTCTTTT
TGGAACAGAAGAAGCATTGATTCGTGTAGACATGAGCGACTACATGGAAAAGCAAAACGCATCTCGACTTGTTGGAGCGC
CTCCGGGATACATCGGCTATGAAGAAGGCGGATTGCTTACGGAACAAGTTCGGCAACACCCGTATTCAGTTGTGCTTCTT
GATGAAATTGAAAAAGCTCACCACGACATTTACAATCTTTTGCTTCAGCTACTTGAAGAGGGCGAATTAAAAGATAACCT
TGGTCATACCGTGAGCTTCAAAAATACAGTTATCATTATGACCAGCAATGCGGGCGCAAGAGAAATTACTGCGGAAAGCA
AAATGGGATTTTCCACAGCAAAAGAAGGAATTGTTCCATACAGCGAAATAAAATCCAGCGCAATGGAAGAACTCAAAAAA
ATCATGTCGCCTGAACTTCTTAATCGAATTGACGATGTGATAGTTTTCGATGCGCTTTCAAAAAAACAAATTGCGTCCAT
ACTCGAAATTCAAATTAAAGAGCTTGAAGATCGTCTTGATGAAAAATCAATTTCACTTGTGCTTAAGACTAAAGCCAAAG
AATATCTTGTGGAACACGGCTACGAACCTTCAATGGGAGCGCGCCCGATGCGTCGTCTGCTTCAAAAAGAAATTGAAGAT
CCTCTTGCAAATCTTCTTTTGCAAAATGAAAATGAGGAAGGCGAAACAGTTTCCGTGGATTGCATTGACGGAACTATTTC
ATTAAAACTCAGCAAGAAAAAAAAGAAAGCAGCAGCTGCAAAGAAAAAGCAGGAGCTTTCAGCGCAAGAAGCAAATCAAC
TTTCATAA

Protein sequence :
MYENFSPRAQRILVALAQDEAYFLGSRQIDPEHIILALLKSAEGLGYVVLQQLRINVLTLQLAIEQSLPSRFPDTELKTI
PNSDRTERFLNQAAFDAKTMQCNYVGTEHLLFAAATEERSLLWAYLKRAGISIEQVKKTIADIQRKIPSSAVKDPRNFSG
GNFAQETPVPFMADGSVQRKQKQSGILAQFSRDLTQDAKDGNLDPVVGREKEVLRTIQILSRRTKNNPVLVGEPGVGKTA
IAESLAQRIANGNVPANLFGKKILQLDLAAMIAGTKYRGEFEERLKRVMKEIKESKNIILFVDELHTIIGAGGPEGSMDA
SNMIKPALSRGELQMIGATTTKEYRKYFEKDSALARRFQTVKVEEPSEYETQEILLGLKKYYEEFHHVIYEDDVIPIIVK
YSKRYISERFLPDKAIDILDEAGAAKKMQEDVRPEELDKLESEYARYNEQKRELVASQEYEKAAYIRDHINLLRSRIDDL
NRKWKSSDAAKKRRVCAEDVCKIISEISGIDVSKLDEGKSGRLLNMEKILHEEVVGQDEAVASICSAVRRSKAGISSHKR
PVGSFIFLGPTGVGKTQLAKSLAKFLFGTEEALIRVDMSDYMEKQNASRLVGAPPGYIGYEEGGLLTEQVRQHPYSVVLL
DEIEKAHHDIYNLLLQLLEEGELKDNLGHTVSFKNTVIIMTSNAGAREITAESKMGFSTAKEGIVPYSEIKSSAMEELKK
IMSPELLNRIDDVIVFDALSKKQIASILEIQIKELEDRLDEKSISLVLKTKAKEYLVEHGYEPSMGARPMRRLLQKEIED
PLANLLLQNENEEGETVSVDCIDGTISLKLSKKKKKAAAAKKKQELSAQEANQLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-164 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tresu_2117 YP_004366283.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 2e-146 47
Tresu_2117 YP_004366283.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 2e-175 45