|
Name : Tresu_1939 (Tresu_1939) Accession : YP_004366118.1 Strain : Treponema succinifaciens DSM 2489 Genome accession: NC_015385 Putative virulence/resistance : Resistance Product : small GTP-binding protein Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0480 EC number : - Position : 2078785 - 2080704 bp Length : 1920 bp Strand : - Note : COGs: COG0480 Translation elongation factors (GTPase); InterProIPR005517:IPR005225:IPR000795:IPR004161:IPR 000640; KEGG: bll:BLJ_1245 translation elongation factor G; PFAM: protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, do DNA sequence : ATGAAAATAATCAATATTGGCATTCTTGCCCACGTAGACGCTGGAAAGACGACCTTGACGGAGAGCCTGCTATATGCCAG CGGAGCCATTTCAGAACCGGGGAGCGTCGAAAAAGGGACAACGAGGACGGACACCATGTTTTTGGAGCGGCAGCGTGGGA TTACCATTCAAGCGGCAGTCACTTCCTTCCAGTGGCACAGATGTAAAGTCAACATTGTGGATACGCCCGGCCACATGGAT TTTTTGGCGGAGGTGTACCGCTCTTTGGCTGTTTTAGATGGGGCCATCTTGGTGATCTCCGCTAAAGATGGCGTGCAGGC CCAGACCCGTATTCTGTTCCATGCCCTGCGGAAAATGAACATTCCCACCGTTATCTTTATCAACAAGATCGACCAGGCTG GCGTTGATTTGCAGAGCGTGGTTCAGTCTGTTCGGGATAAGCTCTCCGCCGATATTATCATCAAGCAGACGGTGTCGCTG TCCCCGGAAATAGTCCTGGAGGAAAATACCGACATAGAAGCATGGGATGCGGTCATCGAAAATAACGATAAATTATTGGA AAAGTATATCGCAGGAGAACCAATCAGCCGGGAAAAACTTGTGCGGGAGGAACAGCGGCGGGTTCAAGACGCCTCCCTGT TCCCGGTCTATTATGGCAGCGCCAAAAAGGGCCTTGGCATTCAACCGTTGATGGATGCGGTGACAGGGCTGTTCCAACCG ATTGGGGAACAGGGGAGCGCCGCCCTATGCGGCAGCGTTTTCAAGGTGGAGTATACAGATTGCGGCCAGCGGCGTGTCTA TCTACGGCTATACAGCGGAACGCTGCGCCTGCGGGATACGGTGGCCCTGGCCGGGAGAGAAAAGCTGAAAATCACAGAGA TGCGTATTCCATCCAAAGGGGAAATTGTTCGGACAGACACCGCTTATCCGGGTGAAATTGTTATCCTTCCCAGCGACAGC GTGAGGTTAAACGATGTATTAGGGGACCCAACCCGGCTCCCTCGTAAAAGGTGGCGTGAGGACCCCCTCCCCATGCTGCG GACGTCGATTGCGCCGAAAACGGCAGCGCAAAGAGAACGGCTGCTGGACGCTCTTACGCAACTTGCGGATACTGACCCGC TTTTGCGCTGCGAGGTGGATTCCATCACCCATGAGATCATTCTTTCTTTTTTGGGCCGGGTGCAGTTGGAGGTTGTTTCC GCTTTGCTGTCGGAAAAATACAAGCTTGAAACAGTGGTAAAGGAACCCACCATCATTTATATGGAGCGGCCGCTCAAAGC AGCCAGCCACACCATCCATATCGAGGTGCCGCCCAACCCGTTTTGGGCATCTATCGGACTGTCTGTTACACCACTCCCGC TTGGCTCCGGCGTACAATACGAGAGCCGGGTTTCGCTGGGATACTTGAACCAGAGTTTTCAAAACGCTGTCAGGGATGGT ATCCGTTACGGGCTGGAGCAGGGCTTGTTCGGCTGGAACGTAACGGACTGTAAGATTTGCTTTGAATACGGGCTTTATTA CAGTCCAGTCAGCACGCCGGCGGACTTCCGCTCATTGGCCCCGATTGTATTGGAACAGGCATTGAAGGAATCGGGGACGC AGCTGCTGGAACCTTATCTCTCCTTCACCCTCTATGCGCCCCAGGAATACCTTTCCAGGGCTTATCATGATGCACCGAAA TACTGTGCCACCATCGAAACGGCCCAGGTAAAAAAGGATGAAGTTGTCTTTACTGGCGAGATTCCCGCCCGCTGTATACA GGCATACCGTACTGATCTGGCCTTTTACACCAACGGGCAGAGCGTATGCCTTACAAAACTGAAAGGGTATCAGGCCGCTG TCGGCAAGCCAGTCATCCAGCCCCGCCGTCCAAACAGCCGCCTGGACAAGGTGCGCTATATGTTTCAGAAGATAATGTAA Protein sequence : MKIINIGILAHVDAGKTTLTESLLYASGAISEPGSVEKGTTRTDTMFLERQRGITIQAAVTSFQWHRCKVNIVDTPGHMD FLAEVYRSLAVLDGAILVISAKDGVQAQTRILFHALRKMNIPTVIFINKIDQAGVDLQSVVQSVRDKLSADIIIKQTVSL SPEIVLEENTDIEAWDAVIENNDKLLEKYIAGEPISREKLVREEQRRVQDASLFPVYYGSAKKGLGIQPLMDAVTGLFQP IGEQGSAALCGSVFKVEYTDCGQRRVYLRLYSGTLRLRDTVALAGREKLKITEMRIPSKGEIVRTDTAYPGEIVILPSDS VRLNDVLGDPTRLPRKRWREDPLPMLRTSIAPKTAAQRERLLDALTQLADTDPLLRCEVDSITHEIILSFLGRVQLEVVS ALLSEKYKLETVVKEPTIIYMERPLKAASHTIHIEVPPNPFWASIGLSVTPLPLGSGVQYESRVSLGYLNQSFQNAVRDG IRYGLEQGLFGWNVTDCKICFEYGLYYSPVSTPADFRSLAPIVLEQALKESGTQLLEPYLSFTLYAPQEYLSRAYHDAPK YCATIETAQVKKDEVVFTGEIPARCIQAYRTDLAFYTNGQSVCLTKLKGYQAAVGKPVIQPRRPNSRLDKVRYMFQKIM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tet(W) | YP_005160006.1 | tetracycline resistance protein | Not tested | Not named | Protein | 0.0 | 99 |
| SSU98_0928 | YP_001200485.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 0.0 | 69 |
| SSU05_0922 | YP_001198287.1 | translation elongation factor (GTPases) | Not tested | 89K | Protein | 0.0 | 69 |
| tetO | AFJ97266.1 | truncated tetracycline resistant protein | Not tested | Not named | Protein | 4e-133 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | DQ294299.gene.p01 | Protein | 0.0 | 99 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | AJ222769.gene.p01 | Protein | 0.0 | 98 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | AY485126.gene.p01 | Protein | 0.0 | 96 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | M85225.gene.p01 | Protein | 0.0 | 69 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | AM180355.1.gene636.p | Protein | 0.0 | 69 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | X04388.gene.p01 | Protein | 0.0 | 69 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | NC_009782.5559075.p0 | Protein | 0.0 | 68 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | AJ295238.gene.p01 | Protein | 0.0 | 68 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | NC_002758.1120355.p0 | Protein | 0.0 | 68 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | FN594949.1.gene24.p0 | Protein | 0.0 | 68 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | L09756.gene.p01 | Protein | 0.0 | 67 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | AJ514254.gene.p01 | Protein | 3e-112 | 44 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | L42544.gene.p01 | Protein | 2e-119 | 44 |
| Tresu_1939 | YP_004366118.1 | small GTP-binding protein | Z21523.gene.p01 | Protein | 1e-102 | 42 |
