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Name : Tresu_1529 (Tresu_1529) Accession : YP_004365726.1 Strain : Treponema succinifaciens DSM 2489 Genome accession: NC_015385 Putative virulence/resistance : Virulence Product : UDP-glucuronate 4-epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : 5.1.3.6 Position : 1654421 - 1655443 bp Length : 1023 bp Strand : - Note : COGs: COG0451 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cth:Cthe_1361 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: NAD-dependent epimerase/dehydratase; PF DNA sequence : ATGTCAAATATTTCTTTAGAAAATAAAACGATTTTTGTTACTGGCGCAGCCGGATTTATTGGAAGTTTCTTGTGTAAAAA TCTTTTGGAAAATGTTTCCGGTATAAAAATTATAGGAATTGACTGTATAACTGACTATTATGATGTTTCGTTGAAGCAGG AACGTCTTGATATGCTTTCTTCATTGAAAAAAGATTTTACTTTTGTAAAAGGCGACATAGCGGATAAATCCTTGTTGGAT TCCCTTTTTGAAAAGTATAATCCTGCTGTTGTGGTTAACTTGGCGGCGCAGGCTGGCGTCCGCTATTCAATTGATAATCC CGATGCATATATTCATTCAAATATGATTGGTTTTTACAATATTCTTGAATGTTGCCGCCATAATCCGGTTGAACATCTGG TTTTTGCCTCTTCAAGCAGCGTGTACGGTTCAAACAAAAAAGTTCCTTATTCAACAGAAGATAAGGTTGACAATCCGGTT TCGCTATATGCCGCGACAAAGAAAAGTAATGAGCTTTTTGCGCACGCGTATTCAAAACTTTATAAAATTCCATGCACAGG CTTGCGTTTCTTTACTGTTTACGGACCTATGGGACGTCCTGATATGGCATATTTTAAATTCACAAATAAACTTGTAAAAG GCGAGCCGATTCAAATTTACAATAACGGAGATATGTACCGCGATTTTACTTATGTTGATGACATTGTGAAAGGCGTTCGC GCAGTTATGCAGAAAACTCCGGAAGCTACAGATGACGGCGCGTTATATAAAATTTACAACATTGGAAACAGCAGGCCGGA AAGTCTTATGCGCTTTGTTGAAATCCTTGAAAATTGCCTTATAAAGGAAAATATAATTTCTGAGCAAGGTAAGAAGGAAC TTTTGCCAATGCAGCCGGGTGATGTTTACCAGACGTTCGCTGATGTTTCAGACCTTGAGAAAGACTTTGGCTTTAAACCG GCGACTACTTTGGAACAAGGCCTGGGCGCATTCGCAAAATGGTATAAGGGATATAAAAAATAG Protein sequence : MSNISLENKTIFVTGAAGFIGSFLCKNLLENVSGIKIIGIDCITDYYDVSLKQERLDMLSSLKKDFTFVKGDIADKSLLD SLFEKYNPAVVVNLAAQAGVRYSIDNPDAYIHSNMIGFYNILECCRHNPVEHLVFASSSSVYGSNKKVPYSTEDKVDNPV SLYAATKKSNELFAHAYSKLYKIPCTGLRFFTVYGPMGRPDMAYFKFTNKLVKGEPIQIYNNGDMYRDFTYVDDIVKGVR AVMQKTPEATDDGALYKIYNIGNSRPESLMRFVEILENCLIKENIISEQGKKELLPMQPGDVYQTFADVSDLEKDFGFKP ATTLEQGLGAFAKWYKGYKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-80 | 53 |
