Gene Information

Name : Tresu_1384 (Tresu_1384)
Accession : YP_004365587.1
Strain : Treponema succinifaciens DSM 2489
Genome accession: NC_015385
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1488522 - 1489706 bp
Length : 1185 bp
Strand : +
Note : COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: sbc:SbBS512_E1203 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation;

DNA sequence : 
ATGAAAATAGCAGTAGCAGGAACAGGATACGTAGGACTTTCAAACGCAATTTTGCTTTCACAGCACAATGAAGTTTTCGC
AACAGATATAATTCAGGCTAAAGTTGACTTAATAAACAGCAAAAAATCTCCAATCGTTGACAAGGAAATTGAAGAATACC
TTGCGAATAAAAAACTCAATCTTACGGCCACAACAGACGCAAAACTTGCCTATAATGATGCTGACTTTATCATCATCTCA
ACTCCAACAAACTACGACCCGGAAAAAAACTACTTTGACACATCTTCTGTTGAAGCGGTTCTAAAGCTTGTAAAAGAAAT
AAATCCTGAAGCAACAGTTGTAATAAAATCCACAATTCCAGTCGGCTATACTGAAAAAATCCGCGCGGAAATGGGAATAA
AGAATCTTCTGTTTTCCCCGGAATTTCTTCGTGAAGGACATGCGCTTTATGACAACCTTTATCCGTCAAGAATCGTTGTA
AGCTTTCCAAAAGAACAGCCGGAACTAAAGGAAAAAGCAGAACTGTTCGCATCCCTTTTAAAAGAAGGCGCAATAAAAGA
AGACATAAAGATTCTTTATCCAAACTGCACAGAAGCAGAGGCAATCAAGCTTTTTGCAAACACATATCTTGCCTTGAGAG
TCGCATATTTCAACGAGCTGGACACTTATGCGGAAGTACGCGGACTGGACACAAAGTCTATTATAGAAGGAATCTGTCTG
GATCCAAGAATCGGAGACTTCTACAACAATCCTTCGTTTGGCTACGGCGGTTATTGTCTTCCAAAGGACACAAAGCAGCT
TCTTGCAAACTACAAGGATGTTCCACAGAATTTAATCCATGCGATTGTAGATTCAAATTCAACACGCAAGGACTTTATCG
CAGACCAGATTATCGCAAAAAAGCCAAAAGTTGTGGGAGTTTTCCGCCTTACAATGAAAGCGAACAGCGACAATTTCCGA
CAAAGTTCAATTCAGGGAATCATGAAGCGCGTAAAGGCAAAAGGAATTCCTGTAGTTGTTTACGAGCCATCTTATAAGGA
AGATAAATTTTTCGGCTCAAAAGTAGTAAAAGACCTCGCGGAATTCAAGAAAGACTGCGATGTAATTATTTCAAACAGAA
TGTCTCCTGAACTTTCAGACGTAAAGGAAAAAGTCTACACAAGAGATTTGTATTCTCGCGACTAA

Protein sequence : 
MKIAVAGTGYVGLSNAILLSQHNEVFATDIIQAKVDLINSKKSPIVDKEIEEYLANKKLNLTATTDAKLAYNDADFIIIS
TPTNYDPEKNYFDTSSVEAVLKLVKEINPEATVVIKSTIPVGYTEKIRAEMGIKNLLFSPEFLREGHALYDNLYPSRIVV
SFPKEQPELKEKAELFASLLKEGAIKEDIKILYPNCTEAEAIKLFANTYLALRVAYFNELDTYAEVRGLDTKSIIEGICL
DPRIGDFYNNPSFGYGGYCLPKDTKQLLANYKDVPQNLIHAIVDSNSTRKDFIADQIIAKKPKVVGVFRLTMKANSDNFR
QSSIQGIMKRVKAKGIPVVVYEPSYKEDKFFGSKVVKDLAEFKKDCDVIISNRMSPELSDVKEKVYTRDLYSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-89 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tresu_1384 YP_004365587.1 nucleotide sugar dehydrogenase VFG0963 Protein 4e-97 57