Gene Information

Name : bgla_1g00250 (bgla_1g00250)
Accession : YP_004358685.1
Strain :
Genome accession: NC_015381
Putative virulence/resistance : Virulence
Product : Flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 30689 - 31528 bp
Length : 840 bp
Strand : -
Note : -

DNA sequence : 
ATGATGTCGTATCGATCGAGCGCGCGCGCCGCGCCGCGCCCCTTCTTTCGCCCCTTCGCGGCCGCGCGCCCGTCCCTGGC
GGGCCTGCGCCGCGTGCTGCCCTGGCTGGCCGCGCTGCTGCCGCTGGCCGCTCTCGCGCTGCCCTCGCTGGCGCACGCGC
AGGCGCAGGGCCTGCCCGCCTTCAATACCAGCCCCGGCCCGAACGGCGGCACGACCTACTCGCTGAGCGTGCAGACCATG
CTGCTGCTCACGATGCTGTCGTTCCTGCCGGCCATCGTGCTGATGATGACCAGCTTCACGCGCATCATCATCGTGCTGTC
GCTGCTGCGCCAGGCGCTGGGCACCACCACCACCCCGCCCAACCAGGTGCTGGTGGGCCTGGCGCTGTTCCTCACCCTGT
TCGTGATGTCGCCGGTGCTGGACCGCGCCTACACCGACGGCTACCAGCCGTTCTCGGCCGGCACCCTGCCGATGGACCAG
GCGGTGCAGCGGGGCCTGGCGCCCTTCAAGACCTTCATGCTCAAGCAGACGCGCGAGAGCGACCTCGCGCTGTTCGCGCG
CATCTCCAAGGCGCCGCCGATGCAGGGCCCCGAGGACGTGCCGCTGCCGCTGCTGGTGCCGGCCTTCCTGACCAGCGAGC
TGAAGACCGGCTTCCAGATCGGCTTCACGATCTTCATCCCGTTCCTGATCATCGATCTGGTGGTGGCGAGCGTGCTGATG
TCGATGGGGATGATGATGGTCTCGCCGACCACCATCTCGCTGCCCTTCAAGCTGATGCTGTTCGTGCTGGTGGACGGCTG
GCAGCTGCTGATCGGCTCGCTCGCGCAGAGCTTTACCTGA

Protein sequence : 
MMSYRSSARAAPRPFFRPFAAARPSLAGLRRVLPWLAALLPLAALALPSLAHAQAQGLPAFNTSPGPNGGTTYSLSVQTM
LLLTMLSFLPAIVLMMTSFTRIIIVLSLLRQALGTTTTPPNQVLVGLALFLTLFVMSPVLDRAYTDGYQPFSAGTLPMDQ
AVQRGLAPFKTFMLKQTRESDLALFARISKAPPMQGPEDVPLPLLVPAFLTSELKTGFQIGFTIFIPFLIIDLVVASVLM
SMGMMMVSPTTISLPFKLMLFVLVDGWQLLIGSLAQSFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 3e-28 43
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 3e-26 43
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 2e-26 43
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 3e-26 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 3e-27 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-25 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 9e-29 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 7e-29 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 9e-29 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 9e-29 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 9e-29 42
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 1e-25 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 1e-25 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-28 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 1e-14 41
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG2494 Protein 1e-85 90
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG2338 Protein 2e-65 69
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG1259 Protein 1e-57 62
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG2016 Protein 2e-50 53
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG0519 Protein 1e-26 43
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG0044 Protein 1e-28 43
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG0394 Protein 5e-26 43
bgla_1g00250 YP_004358685.1 Flagellar biosynthetic protein FliP VFG0188 Protein 3e-27 42