Gene Information

Name : SAR11G3_01248 (SAR11G3_01248)
Accession : YP_004358462.1
Strain : Candidatus Pelagibacter sp. IMCC9063
Genome accession: NC_015380
Putative virulence/resistance : Virulence
Product : glutamine synthetase type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1103619 - 1105025 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGACTGCAGAGAATATTTTAAAAACAATTAAAGATAAAGAGATTGAATTTGTAGACTTGAGGTTTACGGACCCTAGAGG
GAAACTTCAACACTTAACTCAAGATGTCAGCACCGTTGATGCTGAATTTTTAAACGATGGAACTTTTTTTGATGGCTCAT
CTATTGCTGGATGGAAAGCTATTAACGATTCTGACATGATTTTAAAACCAGATTTAACAAGATCTTTTGTTGATCCGTTT
ACTTCTCATAATACCTTAGTTATTTTTTGCGATATTATGGATCCTATTAAAAAAGATTACTATGAAAGAGATCCAAGATC
GATTGCAAAAAAAGCAGAAGCTTATTTAAAAACGACAGGTATTGGTGATACTATTTATTTTGGACCTGAACCTGAATATT
TTGTCTTTGATGATGTAAAGATTTCTAACTCCATGAATAAAGTTTCTTTTGAAATTGACAGTTCTGAAGGTCCCTACAAT
TCAGATAAAAAATATGAAAATGGTAACATGGGTCACAGACCTGGGGTAAAAGGTGGATATTTTCCAGTGCCGCCAGTTGA
TAGCTGCCAAGACTTAAGAGCTGAAACTTTAAAAGCAATGAAAGACATGGGTGTGAAAGTAGAAAAGCATCATCATGAAG
TTGCGCCTTCTCAGCATGAACTAGGAACTATGTTTGATACAATGGTTACTAATGCAGACAATATGCAAATTTATAAATAC
GCAGCTCATATGGTTGCGCATTCTTTTGGAAAGACTGCAACGTTTATGCCAAAACCAATTAAGGGAGATAATGGTTCGGG
CATGCACTGTCACCAATCTATTTGGAAAGATGGTAAGCCAACATTTGCTGGTGATAAGTATGCAGGTCTATCGCAAGAGT
GTCTTTATTATATTGGTGGAATCATTAAGCATGCTAAAGCTCTTAATGCATTTACCAACGCCACCACGAACAGTTACAAG
AGATTAATTCCTGGGTTTGAAGCTCCGGTTATTCTTGCATACTCTGCAAGAAATAGATCTGCAGGTTGTAGAATACCATT
TAGCTCTAGTCCTAAAGGAAAAAGAGTTGAGGTAAGATTCCCAGATGCTGCTGGAAATCCCTATTTAACTTTTGCCTCTA
TGTTAATGGCAGGACTTGATGGAATTAAAAATAAGATTGATCCAGGAAAACCTTTTGATAAAGATTTATATTCTTTAAGT
GCTGAAGAGCTTGAAGGTGTACCGCAAGTTTGTGGTTCCTTACGAGAAGCCCTAGAAAGTCTTGACAACGATAGATCCTT
TTTAACTGCGGGCAAGGTGTTTACTGATGATCAAATATCAGCCTACATTGATCTTAAAATGGAAGAGGTTTACAATTTAG
AACATGCTCCTCATCCAGTAGAATACCAAATGTACTACAGCTCTTAA

Protein sequence :
MTAENILKTIKDKEIEFVDLRFTDPRGKLQHLTQDVSTVDAEFLNDGTFFDGSSIAGWKAINDSDMILKPDLTRSFVDPF
TSHNTLVIFCDIMDPIKKDYYERDPRSIAKKAEAYLKTTGIGDTIYFGPEPEYFVFDDVKISNSMNKVSFEIDSSEGPYN
SDKKYENGNMGHRPGVKGGYFPVPPVDSCQDLRAETLKAMKDMGVKVEKHHHEVAPSQHELGTMFDTMVTNADNMQIYKY
AAHMVAHSFGKTATFMPKPIKGDNGSGMHCHQSIWKDGKPTFAGDKYAGLSQECLYYIGGIIKHAKALNAFTNATTNSYK
RLIPGFEAPVILAYSARNRSAGCRIPFSSSPKGKRVEVRFPDAAGNPYLTFASMLMAGLDGIKNKIDPGKPFDKDLYSLS
AEELEGVPQVCGSLREALESLDNDRSFLTAGKVFTDDQISAYIDLKMEEVYNLEHAPHPVEYQMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-113 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAR11G3_01248 YP_004358462.1 glutamine synthetase type I VFG1399 Protein 4e-102 49