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Name : SAR11G3_01175 (SAR11G3_01175) Accession : YP_004358389.1 Strain : Candidatus Pelagibacter sp. IMCC9063 Genome accession: NC_015380 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1039945 - 1040418 bp Length : 474 bp Strand : - Note : - DNA sequence : ATGAGTGTAAAAAAAAAACCTGTAGACAACATTGTTTGTCAAAACAGAAAAGCTAGTTTTAATTTTTTTTTTGAAGAAAT TGTTGAATCTGGAATTGAGCTGGTTGGACCCGAGGTAAAATCTCTAAGATCAGGCAAAGCCACTATTTCAGAATCGTATG CAACCGATCAAGAAGGAGAGATTTTTTTAATCAATTCATACATTCCTCAATATTTGCAATCTAGTTACAATAATCACGAC CCCAAAAGGAATAGGAAACTTTTATTAAAAAAAAGAGAAATAAGTAAATTGATTGGAAAAATTAATAGAGATGGTTATAG CTTAGTTCCAACTAAAATTTATTTTAACAAAAAAGGAATAGCGAAAGTACAAATAGCTCTTGCTAAGGGTAAAAAAAATC ACGATAAAAGGGAAACTAAAAAGAATAGAGACTGGGATAGAGAGAAGTCAAGAATTTTTAGAAAAACTAGCTAA Protein sequence : MSVKKKPVDNIVCQNRKASFNFFFEEIVESGIELVGPEVKSLRSGKATISESYATDQEGEIFLINSYIPQYLQSSYNNHD PKRNRKLLLKKREISKLIGKINRDGYSLVPTKIYFNKKGIAKVQIALAKGKKNHDKRETKKNRDWDREKSRIFRKTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-17 | 45 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-18 | 44 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 7e-21 | 43 |
