|
Name : PSEBR_a745 (PSEBR_a745) Accession : YP_004351909.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : transposase family IS66 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 962374 - 963909 bp Length : 1536 bp Strand : - Note : - DNA sequence : ATGACTTCCTCGCCCAATCTCGATCAAATGACACCGGAACAGCTACGTGCCTTGGCCGAACAGGCCTTGCAGTTGCTGTC CCAGGTCGACTCGATGGGCCAGAAAATCCATCGCCTTGAAACGGTCAACGAGCAACTCGCTCATGAGATCGCCATCCTCA AGCGACACAAGTTCGCCAAGCGCAGCGAACAGCTAAGCCCTGACCAAGGTAGTTTGCTCGACGATGTGCTCGACACTGAT ATCGCGGCCATCGAGGCCGAGCTGAAGGCGGTCAATCCGCCACCTGCACCGGACGAGCTACGTCAGAAACCCAAGCGTGC GCCGCTGCCACCGCAGTTCCCACGTACAGTGATCCGTCACGAGCCAGAAAACACCCAGTGCGTCTGCGGCTGCCAACTTC AGCGCGTTGGCGAAGACGTCAGCGAGAAGCTCGATTACACACCCGGCGTGTTCACCGTCGAGCAGCATGTGCGTGGAAAA TGGGCCTGCCGCCAGTGCGAAACACTGATCCAGGCGCCTGTGCCGGCCCAAGTGATCGACAAGGGCATCCCGACCGCAGG CCTGTTGGCCCATGTGATGGTGGCGAAGTTCGCCGACCATTTACCGCTGTACCGGCAGGAGAAGATTTTTGCTCGGGCCG GGCTGGCGATTGCTCGCTCGACACTGGCGCAATGGGTCGGACAGACCGGCGTACAACTCCAGCCTCTGGTCGATGCGCTG CGTGAACAAGTGTTGGCCCAAGGCGTGATCCACGCCGATGAGACTCCGGTTCAGATGCTCGCGCCAGGCGAGAAGAAAAC TCACCGCGCTTACGTCTGGGCCTACAGCACCACGCCGTTTTCGGCGCTCAAGGCTGTGGTTTATGAATTCAGTCCCAGTC GTGCAGGCGAGCATGCGCGCAACTTCCTTGGGCGGTGGAACGGCAAGCTGGTATGCGACGGTTTCGCTGGCTACAAAGCC GGTTTCGAGAAAGGCATCACCGAAATTGGCTGCATGGCCCACGCCCGTCGCAAGTTTTTCGATCTGCACGTGGCGAACAA AAGCCAGCTGGCTGAACAAGCGCTGTACTCGATTGGCGGCTTGTACGAAGTTGAACGCCAAGCTCGGGACATGAGCGATG AGGATCGTTGGCGAATACGCCAGGAAAAGGCAGCCCCGATCATCAAAACGCTGCATGACTGGATGTTGGCCCAGCGTGAT CTGGTGCCCAACGGATCGGCAACAGCCAAAGTCTTGGATTACAGCCTTAAACGCTGGGTAGCGCTGACGCGCTACCTGGA CGACGGGGCTGTGCCCATTGACAACAACCAAGTCGAAAACCAGATCAGGCCGTGGGCACTTGGGCGCTCCAACTGGTTGT TCGCCGGATCGCTACGCAGCGGCAAACGGGCGGCAGCAATCATGAGCTTGATCCAGTCTGCACGCATGAATGGGCATGAT CCGTATGCGTACCTGAAGGACGTTCTTACTCGCCTGCCAATGCAGCAGGCGAGTAAGATTGACCAGCTGTTACCGCATCA GTGGGTATCTGCCTGA Protein sequence : MTSSPNLDQMTPEQLRALAEQALQLLSQVDSMGQKIHRLETVNEQLAHEIAILKRHKFAKRSEQLSPDQGSLLDDVLDTD IAAIEAELKAVNPPPAPDELRQKPKRAPLPPQFPRTVIRHEPENTQCVCGCQLQRVGEDVSEKLDYTPGVFTVEQHVRGK WACRQCETLIQAPVPAQVIDKGIPTAGLLAHVMVAKFADHLPLYRQEKIFARAGLAIARSTLAQWVGQTGVQLQPLVDAL REQVLAQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALKAVVYEFSPSRAGEHARNFLGRWNGKLVCDGFAGYKA GFEKGITEIGCMAHARRKFFDLHVANKSQLAEQALYSIGGLYEVERQARDMSDEDRWRIRQEKAAPIIKTLHDWMLAQRD LVPNGSATAKVLDYSLKRWVALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHD PYAYLKDVLTRLPMQQASKIDQLLPHQWVSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL059 | AAP84184.1 | transposase | Not tested | PAPI-1 | Protein | 0.0 | 89 |
| tnpC | AEZ06051.1 | transposase | Not tested | Tn6167 | Protein | 4e-139 | 54 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-64 | 42 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 3e-66 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEBR_a745 | YP_004351909.1 | transposase family IS66 | VFG1700 | Protein | 4e-65 | 42 |
| PSEBR_a745 | YP_004351909.1 | transposase family IS66 | VFG1513 | Protein | 1e-66 | 42 |
