Gene Information

Name : PSEBR_a740 (PSEBR_a740)
Accession : YP_004351902.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 956123 - 956620 bp
Length : 498 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATATCACAAGCTTGTAGCCGGTGAAACGACCGGTACCTATGTCATGGAGAGTCCAGTCACCGAAGCTGACATCCT
GCAGATGGCTCAACAACTGGCGATGAGTCGTCTGTCTAAAGGCCGAGCACTGACTGAGCCGAAGCAGGTTTTCAGTCACC
TGCAAACACTGCTGCAGTACCATGAGTATGAAGTCTTTGCCTTGCTAATGCTTGATGCCAAGCACCGGGTGATTGGTTTC
AGAGAACTGTTCAGAGGCACTCTGGATGGTGCAAGCGTGTATCCACGGGAAGTGGTGAAGATCGCTTTAGAGCACAACGC
GGCGGCCGTAATCCTGGTTCATAATCATCCCTCCGGCGACCCAGAGCCTAGCCAGGCCGATTACGCATTGACCACCACCC
TCAAGAACGCACTCAACATGGTCGGTACCCGGATATTGGATCATGTGGTGGTGGGTCATGACGGCTGCGTGTCGTTGGCT
GAACGGGGGTATCTATAA

Protein sequence : 
MKYHKLVAGETTGTYVMESPVTEADILQMAQQLAMSRLSKGRALTEPKQVFSHLQTLLQYHEYEVFALLMLDAKHRVIGF
RELFRGTLDGASVYPREVVKIALEHNAAAVILVHNHPSGDPEPSQADYALTTTLKNALNMVGTRILDHVVVGHDGCVSLA
ERGYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 4e-31 52
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-29 52
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-29 52
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 4e-29 52
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 6e-21 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a740 YP_004351902.1 DNA repair protein VFG1119 Protein 2e-29 52