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Name : PSEBR_a5566 (PSEBR_a5566) Accession : YP_004357100.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Virulence Product : chaperone Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6709281 - 6711971 bp Length : 2691 bp Strand : + Note : - DNA sequence : ATGGGTGAAATCAGTCGCGCCGCGTTGTTCGGCAAACTCAACAGCGTGGCCTACAAAGCCATCGAAGCCGCCACCGTGTT CTGCAAGTTGCGCGGTAACCCTTATGTGGAACTGGCCCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGC ACCGCATCATCCGCCAGTTCAACATCGAACCGGCGCGCCTGGCCCGTGACCTGACCGAAGCCCTGGATCGCCTGCCACGG GGTTCGACGTCCATCACCGACCTGTCGTCCCACGTCGAAGAAGCCGTGGAGCGCGGCTGGGTCTACGGCAGCCTGATGTT CGGCGAAAGCCAGGTTCGCACCGGTTACCTGGTGCTGGGCATTCTCAAGACCCCGAGCCTGCGCCACGCACTGCTGGGCT TGTCGTCGGAGTTCGATAAGGTCAAGGTCGAAGCCCTGAGCGAACGGTTTGACGAATACGTCGGCGACTCGCCGGAAAAC GCCCTGACCGCCAGCGACGGCTTCAATGCCGGCGCGGTGCCGGGCGAAGCCAGCGGCGCCATGGCCCCTAGCGCCATGGG CAAGCAGGAAGCCCTCAAGCGCTTTACCGTCGACCTCACCGAGCAGGCCCGCAGCGGCAAGCTCGACCCGATCGTCGGCC GTGACGAAGAGATCCGCCAACTGGTGGACATCCTCATGCGCCGCCGGCAGAACAACCCGATCCTTACCGGTGAAGCCGGC GTGGGCAAGACCGCCGTGGTCGAAGGCTTCGCCCTGCGCATCGTCGCCGGCGACGTGCCGCCGGCCCTCAAGGACGTGGA ACTGCGCAGCCTCGACGTGGGCCTGTTGCAGGCCGGCGCCAGCATGAAAGGCGAGTTCGAACAGCGCCTGCGCCAGGTCA TCGAAGACGTCCAGGCCTCGCCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTCGGTGCCGGTGGCGCC GCCGGCACGGGCGACGCGGCCAACCTGCTCAAGCCGGCGTTGGCCCGTGGCACCTTGCGCACCGTGGCCGCCACGACCTG GGCCGAGTACAAGAAGCACATCGAAAAAGACCCGGCCCTGACCCGCCGCTTCCAAGTGGTGCAAGTGGCCGAGCCGTCGG AAGACAAGGCCCTGCTGATGATGCGCGGCGTGGCCTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCTTCGGTCAAGCTGTCCCACCGCTACATTCCCGCGCGCCAGCTGCCGGACAAATCCGTGAGCCTGCTGGACAC CGCCTGCGCCCGCGTCGCCATCAGCCTGCACGCCGTACCGGCCGAAGTGGACGACAGCCGTCGGCGCATCGAAGCGCTGG AAACCGAGTTGCAAATCATCGCCCGTGAACACGCGATTGGCGTGGTCATCGGCAACCGCCAGACCCAGAGCGAAACCCTG CTGAGCGCCGAGCGCGAACGCCTGGCCGAGCTGGAAGGCCGCTGGGCCGAAGAGAAAACCCTGGTGGACGAACTGCTCGC CACCCGCGCCACCTTGCGCGAACGCGTTGGCGTGGTGGACAGCGAAGACAACAGCGAAGCTTCTGACAACGAAAGCCACC AACTGCGCGAGAAGCTGGTGGACCTGCAACAGCGCCTGACCGCCCTGCAAGGCGAAACCCCGCTGATCCTGCCGACCGTG GATTACCAGGCCGTGGCCTCGGTGGTCGCCGACTGGACCGGTATCCCGGTGGGCCGCATGGCCCGCAACGAACTGGAAAC CGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCATGCCTTGCAGATGATTGCCAAGCGCATCC AGACCTCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATTGGTGTGTTCATGCTCGCCGGCACCTCCGGCGTGGGCAAG ACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTCATCACCATCAACATGAGCGAGTTCCA GGAAGCCCACACCGTATCGACCCTCAAGGGTGCGCCACCGGGCTACATCGGCTATGGCGAAGGCGGCGTGCTGACCGAAG CCGTGCGGCGCAAACCGTACAGTGTGGTGTTGCTGGACGAGGTCGAGAAGGCCCACCCGGACGTGCATGAGATCTTCTTC CAGGTGTTCGACAAAGGCGTGATGGAGGACGGTGAAGGCCGGGTGATCGACTTCAAGAACACCTTGATCCTGCTGACCAC CAACGCCGGCACCGAGTTGATTGCCCAGGTCTGCAAAGACCCGCAGAACGTGCCCGAGCCGGAAGAAATCGCCAAGGCCC TGCGCCAACCGCTGCTGGAGATTTTCCCGCCAGCCTTGCTGGGCCGCCTGGTGACGATCCCGTACTACCCGCTCAGCGAC GAGATGCTCAAGGCCATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGCGTGGAAAGCACCCACAAAGTCGCCTTCGA CTACGACGACGCGGTGATCGACCTGATCGTCTCGCGTTGCACCGAAACCGAAAGCGGCGGGCGCATGATCGACACCATCC TGACCAACAGCCTGCTGCCGGACATGAGCCGCGAGTTCCTGACCCGCATGCTCGAAGGCAAGGCTTTGGCCGGGGTGCGG ATCAGCGCCGTGGACAATGAATTGCAGTACGATTTCAGCGACGCGGCCTGA Protein sequence : MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNIEPARLARDLTEALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPEN ALTASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASPKPIILFIDEAHTLVGAGGA AGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGNRQTQSETL LSAERERLAELEGRWAEEKTLVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLVDLQQRLTALQGETPLILPTV DYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGK TETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSD EMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVR ISAVDNELQYDFSDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEBR_a5566 | YP_004357100.1 | chaperone | VFG2076 | Protein | 0.0 | 88 |
| PSEBR_a5566 | YP_004357100.1 | chaperone | VFG2084 | Protein | 1e-144 | 43 |
