Gene Information

Name : PSEBR_a554 (PSEBR_a554)
Accession : YP_004351706.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 690686 - 692083 bp
Length : 1398 bp
Strand : +
Note : -

DNA sequence :
ATGAACGAAATCACCGCTCCCGAGCAATACGATCTGCAAACCGCTGCCCTGAAGGTGCCTCCGCATTCCATCGAGGCCGA
ACAGGCCGTGCTCGGTGGCCTGATGCTGGACAACAACGCCTGGGAGCGTGTGCTCGATCAAGTCTCCGACGGCGATTTCT
ACCGGCATGACCACCGTCTGATTTTCCGTGCGATCGCCCGTCTGGCCGATCAGAACATGCCGATCGACGTCGTGACCCTG
GCCGAGCAATTGGACAAGGAAGGGCAGACGTCCCAGGTCGGCGGCCTCGGTTACCTGGGCGAACTGGCGAAAAACACGCC
GTCGGTCGCCAACATCAAGGCCTATGCCCAGATCGTGCGCGAGCGGGCGACCTTGCGCCAATTGATCGGCATCAGCACCG
AAATCGCCGACAGCGCCTTCAACCCGGAAGGCCGCACCGCCGCCGAGATCCTTGACGAAGCCGAACGGCAGATCTTCCAG
ATCGCCGAGGCCCGCCCGAAAACCGGCGGCCCGGTCAGCGTCAACGACCTGCTGACCAAGGCCATCGATCGCATCGACAC
CTTGTTCAACACCGACAACGCCATCACCGGCCTGTCCACCGGTTACACCGACCTCGACGAGAAGACCAGCGGCCTGCAAC
CGTCCGACCTGGTCATCGTCGCCGGCCGTCCGTCCATGGGTAAGACCACCTTTGCGATGAACCTGGTGGAAAACGCCGTG
CTGCGCAGCGACAAGGCGGTCCTGGTGTACTCCCTCGAGATGCCAGGCGAATCGCTGATCATGCGTATGCTTTCGTCCCT
GGGGCGTATCGACCAGACCAAGGTCCGTTCCGGCCAGCTGGAAGACGACGACTGGCCGCGCCTGACGTCGGCGGTCAACC
TGCTCAACGACCGCAAGCTGTTCATCGACGATACGGCCGGTATCAGCCCGTCGGAAATGCGCGCCCGGACCCGTCGCCTG
GTGCGTGAGCACGGTGACATCGCGCTGATCATGATCGACTACCTGCAGTTGATGCAGATCCCTGGTTCCAGCGGCGACAA
CCGGACCAACGAGATTTCCGAAATCTCCCGTTCCCTCAAGGCCCTGGCCAAGGAATTCAACTGCCCGGTGGTGGCACTTT
CCCAGTTGAACCGTTCCCTGGAACAGCGCCCCAACAAGCGCCCCGTGAACTCCGACTTGCGGGAATCCGGAGCGATCGAG
CAGGACGCCGACGTCATCATGTTCGTGTACCGCGACGAGGTGTATCACCCCGAGACGGAGCACAAGGGCATCGCCGAAAT
CATCATCGGCAAGCAGCGGAACGGCCCGATCGGCTTCATCCGCCTGGCGTTCATCGGTAAATACACTCGGTTCGAGAACC
TGGCGCCGGGTAGCTACAATTTTGACGACGATGAGTAA

Protein sequence :
MNEITAPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIARLADQNMPIDVVTL
AEQLDKEGQTSQVGGLGYLGELAKNTPSVANIKAYAQIVRERATLRQLIGISTEIADSAFNPEGRTAAEILDEAERQIFQ
IAEARPKTGGPVSVNDLLTKAIDRIDTLFNTDNAITGLSTGYTDLDEKTSGLQPSDLVIVAGRPSMGKTTFAMNLVENAV
LRSDKAVLVYSLEMPGESLIMRMLSSLGRIDQTKVRSGQLEDDDWPRLTSAVNLLNDRKLFIDDTAGISPSEMRARTRRL
VREHGDIALIMIDYLQLMQIPGSSGDNRTNEISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGIAEIIIGKQRNGPIGFIRLAFIGKYTRFENLAPGSYNFDDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-120 58
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-107 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 4e-105 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-105 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-105 52
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-98 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-97 47
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-97 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-78 42