Gene Information

Name : PSEBR_a5477 (PSEBR_a5477)
Accession : YP_004356998.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : LytTR family response regulator
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 6608203 - 6608949 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCACTGGCCCGCGAGCGCCTGAGCCGAATGGTTGGCGAGCTCGAGGGTTACAG
TGTCCTGGAGCCGAGCGCCACCAATGGCGAAGAGGCATTGGCCCTTATTGACAGCCACAAGCCGGATATCGTGCTGCTCG
ACATTCGCATGCCTGGCCTGGACGGTCTGCAGGTTGCGGCGAAGTTGTGCGAACGAGAGTCGCCGCCTGCGGTGGTGTTC
TGTACCACCCGGGACGATTTCCCACCCGAGGTGTTGCAGGCCGGTGCCGTGGGCTACCTGGTCAAGCCGGTGGCGGCCGA
GGCGTTGCTTGAAGCCTTGCGCAAGGCCGAGCGACCCAACCGCGTGCAACTGGCGGCGCTGACCCGTCCGGCCGCCGAAA
GCGGTAGCGGCCCGCGCAGCCATATCAGTGCGCGCACCCGCAAAGGCATCGAGCTGATCCCATTGAACCAGGTGGTCTAT
TTCATCGCCGACCACAAATACGTGACCTTGCGTCATGAGAGTGGCGAGGTGTTGTTGGATGAGCCACTCAAGGCCCTCGA
AGACGAGTTCGGCGAACGTTTCGTACGCATCCACCGCAACGCCCTCGTGGCCCGCGAGCGGATCGAGCGTTTGCAACGCA
CCCCCCTTGGGCATTTCCAACTGTTCCTCAAGGGCCTCAATGGCGATGCGCTGATTGTCAGCCGACGGCACGTGGCCGGC
GTGCGCAAAATGATGCAGCAGCTTTAA

Protein sequence : 
MNVLIVDDEPLARERLSRMVGELEGYSVLEPSATNGEEALALIDSHKPDIVLLDIRMPGLDGLQVAAKLCERESPPAVVF
CTTRDDFPPEVLQAGAVGYLVKPVAAEALLEALRKAERPNRVQLAALTRPAAESGSGPRSHISARTRKGIELIPLNQVVY
FIADHKYVTLRHESGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAG
VRKMMQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 6e-44 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 6e-44 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a5477 YP_004356998.1 LytTR family response regulator VFG0119 Protein 4e-93 84