Gene Information

Name : PSEBR_a5476 (PSEBR_a5476)
Accession : YP_004356997.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 6607124 - 6608065 bp
Length : 942 bp
Strand : -
Note : -

DNA sequence :
ATGTGCCCTCGCGAGATCCGCATCGCCACCCGTAAAAGTGCCTTGGCCCTCTGGCAGGCCGAATACGTCAAAGCCCGCCT
GGAAGCGGCCCATCCCGGCCTGATCGTGACCCTGGTGCCCATGGTCAGTCGCGGTGACAAGCTGCTGGATTCGCCGCTGT
CGAAGATCGGCGGCAAGGGCCTGTTCGTCAAGGAACTGGAAACCGCGTTGCTGGACAACGAAGCCGACATCGCCGTGCAT
TCGATGAAAGACGTGCCCATGGACTTCCCCGAAGGCCTGGGCCTGTTTTGCATCTGCGAGCGGGAAGACCCACGCGACGC
GTTCGTCTCCAACACGTTCTCCAGTCTTGAAGCTCTGCCTGCCGGGAGCGTGGTCGGCACTTCCAGCCTGCGTCGCCAGG
CACAGTTGCTGACTCGCCGTCCGGACCTGCAAATCCGTTTCCTGCGCGGTAACGTCAATACGCGCCTGGCCAAGCTCGAT
GCCGGTGAGTACGACGCGATCATCCTCGCCGCCGCCGGCCTGATCCGCCTGGGCTTTGAAGATCGCATCACCTCGGCCAT
CAGCGTCGACGACAGCCTGCCGGCCGGTGGGCAAGGGGCGGTGGGCATCGAGTGTCGCAGCGCCGACAGCGACATCCACG
CCTTGCTGGCGCCGCTGCACCATGAAGACACCGCCACGCGGGTATTCGCCGAACGCGCTCTCAACAAACACCTCAATGGC
GGTTGCCAAGTGCCGATCGCCTGTTACGCCGTGCTGGAAGGCGAACAGGTCTGGTTGCGCGGGCTGGTGGGGGATCCCAA
CGGTGGCCGGCTGCTCAGCGCCGAAGCCCGGGCGCCGCGCCACGATGCCGAGGCGTTGGGCGTGCGGGTGGCCGAAGACC
TGCTGAGCCAGGGCGCCGCCGACATTCTCAAGGCGGTCTACGGCGAGGCCGGCCACACGTGA

Protein sequence :
MCPREIRIATRKSALALWQAEYVKARLEAAHPGLIVTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLDNEADIAVH
SMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEALPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEDRITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHLNG
GCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQGAADILKAVYGEAGHT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-76 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-76 61