Gene Information

Name : PSEBR_a5443 (PSEBR_a5443)
Accession : YP_004356960.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : glycerol-3-phosphate MFS transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2271
EC number : -
Position : 6569611 - 6570960 bp
Length : 1350 bp
Strand : +
Note : -

DNA sequence :
ATGTTTGCTTTCTTTCGCCCTGCCGCACATCAGGCTCCATTGCCTGAAGAAAAAATAGACAGCACCTATCGACGCCTTCG
CTGGCAGATTTTCGCCGGGATTTTCATTGGGTATGCGGGTTACTACCTGCTACGCAAGAACTTCACCCTGGCATTTCCGG
ATCTGATCGCCCAAGGCTATACAAAAGGCCAACTGGGGGTGGCGATGTCGGCGATCGCGATCGCCTACGGCCTTTCCAAG
TTTTTGATGGGCATCGTGTCCGACCGCTCCAACCCTCGTTACTTCCTGCCCTTTGGCCTGATCGTGTCCGCCGGCGTCAT
GTTCGTTTTCGGTTTCGCACCGTGGGCAACCTCCAGCGTGACCATGATGTTCATCCTGTTGTTCATCAACGGTTGGGCCC
AAGGCATGGGTTGGCCACCTAGCGGGCGCACCATGGTCCACTGGTGGTCGCAGAAAGAACGCGGCGGTGTGGTTTCGGTA
TGGAACACCGCCCACAACGTCGGCGGCGGCCTGATCGGTCCACTGGCGATACTTGGCATGGGCTGGTTCAACGACTGGCA
CAGCAAGTTCTACGTACCGGCAGCGGTGGCGCTGCTGGTCGCTGTATTTGCCTTCATTGTCATGCGCGACACGCCGCAAT
CGACGGGCTTGCCACCCATCGAGAAGTACAAGAACGATTACCCGGAAGGCTACGATGCCAGCCACGAAGAAGAGTTCAGC
GCCAAGGACATCTTCGTCAAATACGTGCTGCGCAACAAAATGCTCTGGTTCATCGCGCTGGCCAACGTCTTCGTCTACTT
GTTGCGCTACGGCATCCTGGATTGGGCGCCGACCTACCTTAAAGAGGTCAAGCACTTCAACTTCGACAAGACGTCCTGGG
CTTACTTCCTGTACGAGTGGGCCGGCATTCCCGGCACGCTGCTGTGCGGGTGGATGTCGGACAAGATCTTCCGGGGCAAC
CGTGGCCTGACGGGCATGGTGTTCATGGCATTGGTGACCGTTGCGACGATCGTTTACTGGCTGAATCCGCCGGGCAACCC
GATGGTCGACATGATCTCGCTGTTCGCGATCGGCTTTCTGATCTACGGTCCGGTCATGCTGGTAGGCCTGCAGGCGCTGG
AGCTGGTGCCCAAGAAAGCGGCGGGCACGGCTGCCGGCTTTACCGGTCTGTTTGGTTATCTCGGTGGTTCGGTCGCGGCC
AGTGCCATGATGGGCTACACGGTGGACTATTTCGGCTGGGATGGCGGTTTCATCCTACTGGTTGTCGCCTGCCTGCTGGC
GATGGCCTTCCTCGCGCCAACCCTGTGGCACAAGCAGATCGCCAGTCAGAGCCGCGAAGCGGTCGCCTGA

Protein sequence :
MFAFFRPAAHQAPLPEEKIDSTYRRLRWQIFAGIFIGYAGYYLLRKNFTLAFPDLIAQGYTKGQLGVAMSAIAIAYGLSK
FLMGIVSDRSNPRYFLPFGLIVSAGVMFVFGFAPWATSSVTMMFILLFINGWAQGMGWPPSGRTMVHWWSQKERGGVVSV
WNTAHNVGGGLIGPLAILGMGWFNDWHSKFYVPAAVALLVAVFAFIVMRDTPQSTGLPPIEKYKNDYPEGYDASHEEEFS
AKDIFVKYVLRNKMLWFIALANVFVYLLRYGILDWAPTYLKEVKHFNFDKTSWAYFLYEWAGIPGTLLCGWMSDKIFRGN
RGLTGMVFMALVTVATIVYWLNPPGNPMVDMISLFAIGFLIYGPVMLVGLQALELVPKKAAGTAAGFTGLFGYLGGSVAA
SAMMGYTVDYFGWDGGFILLVVACLLAMAFLAPTLWHKQIASQSREAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpT YP_005684639.1 Glycerol-3-phosphate transporter Not tested PiCp 3 Protein 4e-66 46
cpfrc_00182 YP_003782582.1 hypothetical protein Not tested PiCp 3 Protein 4e-68 46
glpT YP_005680458.1 Glycerol-3-phosphate transporter Not tested PiCp 3 Protein 4e-68 46
glpT YP_005682549.1 Glycerol-3-phosphate transporter Not tested PiCp 3 Protein 2e-68 46
CDB402_0208 YP_005126721.1 putative glycerol-3-phosphate transporter Not tested Not named Protein 1e-68 45