|
Name : PSEBR_a5071 (PSEBR_a5071) Accession : YP_004356510.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 6131750 - 6133198 bp Length : 1449 bp Strand : - Note : - DNA sequence : ATGAGCCAGATCAAAACGCTTACGACCGCCAGCGGCGCTCCTGTCGCCGATAACCAGAACTCTCGTTCCGCCGGCCCGCG CGGCCCGCTGCTGCTCGACGACTTTCACTTGATCGAGAAGCTTGCTCACTTCAACCGCGAAAACATCCCTGAACGTCGCG TGCACGCCAAAGGCTCGGGCGCCTACGGTACATTCACCGTCACCCAGGACATCACTCAGTACACCAGCGCCAAGTTGTTC GAGTCGATCGGCAAGCAGACGCCAACCTTCCTGCGGTTCTCTACCGTGGGTGGTGAACGTGGTTCGGCCGACACTGAACG CGACCCGCGCGGCTTCGCCCTGAAGTTCTACACCGAGGAAGGCAACTGGGACATCGTTGGCAACAACACGCCGGTATTCT TCATTCGTGATCCGTTGAAGTTTCCAGACTTCATCCACACCCAGAAACGTCTGCCGCAAAGCAACCTGAAAAGCGCCCAG GCGATGTGGGATTTCTGGTCGCATTCGCCTGAGGCGTTGCACCAGGTCACCATTCTGTTCTCCGATCGCGGTATTCCGGA TGGCTACCGTCACATGCACGGCTTCGGCAGTCACACCTACAGCCTGATCAACGCGCAGGGTGAGCGCCACTGGGTGAAGT GGCACTACAAGACCCAGCAAGGGATCAAGAACCTCGCGCCGGCAGAGGCAGCACGCCTGGCGGGTACCGACCCGGATTAC GCCCAGCGTGACTTGTTCGGTGCCATCGAGCGCGGTGACTTCCCGAAATGGAGCGTTTGCATCCAGGTCATGACCGAAGC CCAGGCCGCAGCCCATTACGAGAATCCGTTTGACGTCACCAAGACCTGGTCGCAGAAAGAGTTTCCGCTGATCGAAGTCG GTGTGCTCGAGCTCAACCGTAACCCGCTGAATTACTTTGCCGAAGTCGAGCAAGCGGCATTTGGCCCTAGCAACATGGTG CCAGGGGTTGGCCTCTCGCCGGACCGCATGCTGCAGGGACGTGTCTTCGCCTACGCGGATGCGCACCGCTACCGTGTGGG CACCAATCACCAGCAATTGCCGGTGAATGCGCCGCGCAGTCCGGTCAATACCTACCAGCGCGACGGCGCCATGGCGTTTG GCAGCAATGGCGGGGCGGCACCAAACTACGAGCCTAACAGCTACGTGGAGGCACCGAAGCAGGCACCGCGTTACGCAGAA CCAGCACTGGCCCTCAGTGGCGCGGCGGACCGTTACGACCATCGCGAAGACACCGACTACTACAGCCACGCCGGAGCGCT GTTCCGCTTGATGAGCGACGAGCAGAAGGCGCTGTTGATCAGCAACATCGCCGGCGCAATGGGAGGCGTGTCGGCAGATG TGGTTGATCGTCAGTTGCAGCATTTCTTCAAGGCCGATGTTGCCTATGGAGAGGGCATCGCAAAAGCCTTGGGTGTAGCG CTTAACTAA Protein sequence : MSQIKTLTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTQDITQYTSAKLF ESIGKQTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQ AMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAQGERHWVKWHYKTQQGIKNLAPAEAARLAGTDPDY AQRDLFGAIERGDFPKWSVCIQVMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMV PGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNTYQRDGAMAFGSNGGAAPNYEPNSYVEAPKQAPRYAE PALALSGAADRYDHREDTDYYSHAGALFRLMSDEQKALLISNIAGAMGGVSADVVDRQLQHFFKADVAYGEGIAKALGVA LN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-142 | 61 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 4e-112 | 53 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 5e-107 | 48 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 5e-107 | 48 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 5e-107 | 48 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 5e-107 | 48 |
