Gene Information

Name : PSEBR_a4767 (PSEBR_a4767)
Accession : YP_004356190.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : transposase, Mutator family
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 5772974 - 5774221 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence :
ATGCCAACCAAAAAGAAACCCCTGCGTGACCTGCCCAAAATCCCTAAAGAGCTGCTTGAGCAGTTTGGTGAGGGGCTGAT
GACAGCGGAAGCCATCGAGGACGCCTCGGCAGCGTTCAAGAAGGCCCTGATTGAACGAGCCTTGACCGCTGAACTCGGCC
ATCACTTGGGCTATCCCCCGGGCGCGCAGCGCCCGGAGGATGAAACTAATCAGCGCAATGGCAAGAGTGGAAAAACCGTT
TTGACCGGAGATGGCCCGCTGCGGCTGGATATCCCACGCGACCGGGATGGCAGTTTTTCGCCCATTTTGATCCCCAAACA
CGAGCGCCGTTACACCGGTTTCGACGACAAGATCATCGCCATGTACGCCCGGGGCATGACGGTTCGCGAGATCAGAGCGT
TTCTCCTGGAACAGTACGGCACAGATGTTTCGCACGACTTCATCAGCTCAGTCACCGACGCGGTGATGGAAGAGATCGGC
GCTTGGCAGCAACGACCGCTTGAGCCGATGTACCCGGTCATCTTCTTCGACGCGCTGCGGGTCAAAATCAGGGAAGAAGG
TCTGGTCCGCAATAAGGCCATCTACTTGGCCTTGGGCGTACTACCGGACGGAACCCGCGATATCTTGGGCATCTGGATCG
AGACAACGGAAGGCGCCAAGTTCTGGATGAAGGTCTTCAATGACCTCAAGACACGCGGCGTCGAAGACGTGTTGATTGCC
GTGACCGATGGCCTCAAAGGCATGCCAGAAGCCCTGAGCGCGGTGTTTCCTGAGACGACGTTGCAAACCTGCATCGTGCA
TCTGATCCGCAACAGCCTCGACTATGCAGCCTGGGACAAACGTCGGGAACTGGCCAAGGCTCTCAAACCGATCTATCAAG
CGATCAACGCCGAGGCCGCCGAAGCGGCTTTGGACTCGTTCGAAAATGGGCCTTGGGGCAAACAGTACCCGACCGTCGTC
GCTGCTTGGCGACGCGCCTGGGATCGAGTTATCCCGTTTTTTGTCTTCCCACCCGCCATTCGGAAAGTGATCTATACGAC
CAACGCGATCGAGAGCATCAACGCTCAGTTGCGAAAGATCATCAAGACAAGAGGCCACTTCCCAACTGATGACGCTGCCA
CCAAATTAATCTGGCTGGGCTTGCGCAACATCACCGCAAACTGGGGCAGTGCAGCCCATGACTGGAAAAGCGCCATGAAT
CAATTCGCGATCCTGTACGGGGACCGGTTCATCAGGCCGACGTGGTAA

Protein sequence :
MPTKKKPLRDLPKIPKELLEQFGEGLMTAEAIEDASAAFKKALIERALTAELGHHLGYPPGAQRPEDETNQRNGKSGKTV
LTGDGPLRLDIPRDRDGSFSPILIPKHERRYTGFDDKIIAMYARGMTVREIRAFLLEQYGTDVSHDFISSVTDAVMEEIG
AWQQRPLEPMYPVIFFDALRVKIREEGLVRNKAIYLALGVLPDGTRDILGIWIETTEGAKFWMKVFNDLKTRGVEDVLIA
VTDGLKGMPEALSAVFPETTLQTCIVHLIRNSLDYAAWDKRRELAKALKPIYQAINAEAAEAALDSFENGPWGKQYPTVV
AAWRRAWDRVIPFFVFPPAIRKVIYTTNAIESINAQLRKIIKTRGHFPTDDAATKLIWLGLRNITANWGSAAHDWKSAMN
QFAILYGDRFIRPTW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 6e-84 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-94 45
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 3e-85 45
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 3e-82 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 8e-81 43