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Name : PSEBR_a4623 (PSEBR_a4623) Accession : YP_004356043.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 5624714 - 5626060 bp Length : 1347 bp Strand : - Note : - DNA sequence : GTGTCCCTGATCGCTTCTGACCACTTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCTTCCTGGC GAACCGGGGCGTGTCGTTTGCCGTCGCCGATACGCGGGAAAATCCACCTGAGCTGGCCACGCTGCGCCGTGACTATCCGC AGGTGGACGTGCGTTGTGGCGAGCTGGACGTCGAATTCCTGTGCCGCGCCGACGAGCTCTACGTGAGCCCCGGGCTGGCC CTGGCGACTCCGGCCCTGCAGGCGGCCGCTGCCCGTGGCGTGAAATTGTCCGGCGACATCGAGCTGTTCGCGCGTAACGC CAAGGCGCCGATCATCGCCATCAGCGGTTCCAATGCCAAGAGCACCGTCACCACCCTGGTGGGCGAGATGGCCGCGGCGG CCGGCAAGCGCGTCGCCGTGGGCGGCAACCTTGGTACCCCGGCACTGGACCTGCTCAGTGACGACGTCGAGCTGTACGTG ATGGAGCTGTCGAGCTTCCAGCTGGAAACCACCGACCACCTGGGCGCCGAAGTGGCGACCGTGCTCAACGTCAGCGAAGA CCACATGGACCGCTACAGCGGCCTGCCGGCTTATCACCTGGCCAAGCACCGGATCTTCCGTGGTGCCCGGCAAGTGGTGT TCAACCGCCAGGACGCCCTGACTCGTCCGTTGTTGGGCGAAGGCATGCCCTGCTGGTCCTTCGGCCTGGGCGTGCCGGAC TTCAAAGGCTTCGGGCTGCGCGAAGAGAATGGCGAGAAATACCTGGCCTTCGAATTCCAGAACCTGATGCCGGTGCGCGA ACTGAAGATTCGTGGTGCCCATAACCAGGCCAATGCCCTGGCCGCGTTGGCCCTGGGCCATGCGGTCGGCCTGCCGTTCG ACGCCATGCTTTCGGCCCTGCGCACTTTCGCGGGTCTTGAGCACCGCTGCCAGTGGGTGCGCGACCTGGACGGCGTGGCC TGGTACAACGACTCCAAGGCCACCAATGTCGGTGCCGCACTGGCGGCCATCGAAGGGCTGGGCGCGGACATCGAAGGCAA GCTCGTGCTGATCGCCGGCGGCGACGGCAAGGGCGCCGACTTCAAGGACCTGCGCGACCCGGTGGCGGCCAACTGCCGTG CCGTGGTGCTGATGGGCCGTGACCGCGAATTGATCGCCCAGGCCCTCGGCGACGCCGTGCCGCTGGTTCGGGTCGGTTCG CTGGACGAGGCGGTGCAGCAATGCCGCGCTCTCGCGCACCCGGGCGATGCGGTGCTGTTGTCACCGGCCTGCGCCAGTTT CGACATGTTCAAGAACTATGAAGAGCGTGGGCAGTTGTTCGCCCGGGCCGCGGAGGACTTGGCATGA Protein sequence : MSLIASDHFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPQVDVRCGELDVEFLCRADELYVSPGLA LATPALQAAAARGVKLSGDIELFARNAKAPIIAISGSNAKSTVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYV MELSSFQLETTDHLGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVFNRQDALTRPLLGEGMPCWSFGLGVPD FKGFGLREENGEKYLAFEFQNLMPVRELKIRGAHNQANALAALALGHAVGLPFDAMLSALRTFAGLEHRCQWVRDLDGVA WYNDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGADFKDLRDPVAANCRAVVLMGRDRELIAQALGDAVPLVRVGS LDEAVQQCRALAHPGDAVLLSPACASFDMFKNYEERGQLFARAAEDLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 7e-80 | 55 |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 7e-80 | 55 |
