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Name : PSEBR_a4547 (PSEBR_a4547) Accession : YP_004355965.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : transposase, Mutator family Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3328 EC number : - Position : 5531539 - 5532786 bp Length : 1248 bp Strand : - Note : - DNA sequence : ATGCCAACCAAAAAGAAACCCCTGCGTGACCTGCCCAAAATCCCTAAAGAGCTGCTTGAGCAGTTTGGTGAGGGGCTGAT GACAGCGGAAGCCATCGAGGACGCCTCGGCAGCGTTCAAGAAGGCCCTGATTGAACGAGCCTTGACCGCTGAACTCGGCC ATCACTTGGGCTATCCCCCGGGCGCGCAGCGCCCGGAGGATGAAACTAATCAGCGCAATGGCAAGAGTGGAAAAACCGTT TTGACCGGAGATGGCCCGCTGCGGCTGGATATCCCACGCGACCGGGATGGCAGTTTTTCGCCCATTTTGATCCCCAAACA CGAGCGCCGTTACACCGGTTTCGACGACAAGATCATCGCCATGTACGCCCGGGGCATGACGGTTCGCGAGATCAGAGCGT TTCTCCTGGAACAGTACGGCACAGATGTTTCGCACGACTTCATCAGCTCAGTCACCGACGCGGTGATGGAAGAGATCGGC GCTTGGCAGCAACGACCGCTTGAGCCGATGTACCCGGTCATCTTCTTCGACGCGCTGCGGGTCAAAATCAGGGAAGAAGG TCTGGTCCGCAATAAGGCCATCTACTTGGCCTTGGGCGTACTACCGGACGGAACCCGCGATATCTTGGGCATCTGGATCG AGACAACGGAAGGCGCCAAGTTCTGGATGAAGGTCTTCAATGACCTCAAGACACGCGGCGTCGAAGACGTGTTGATTGCC GTGACCGATGGCCTCAAAGGCATGCCAGAAGCCCTGAGCGCGGTGTTTCCTGAGACGACGTTGCAAACCTGCATCGTGCA TCTGATCCGCAACAGCCTCGACTATGCAGCCTGGGACAAACGTCGGGAACTGGCCAAGGCTCTCAAACCGATCTATCAAG CGATCAACGCCGAGGCCGCCGAAGCGGCTTTGGACTCGTTCGAAAATGGGCCTTGGGGCAAACAGTACCCGACCGTCGTC GCTGCTTGGCGACGCGCCTGGGATCGAGTTATCCCGTTTTTTGTCTTCCCACCCGCCATTCGGAAAGTGATCTATACGAC CAACGCGATCGAGAGCATCAACGCTCAGTTGCGAAAGATCATCAAGACAAGAGGCCACTTCCCAACTGATGACGCTGCCA CCAAATTAATCTGGCTGGGCTTGCGCAACATCACCGCAAACTGGGGCAGTGCAGCCCATGACTGGAAAAGCGCCATGAAT CAATTCGCGATCCTGTACGGGGACCGGTTCATCAGGCCGACGTGGTAA Protein sequence : MPTKKKPLRDLPKIPKELLEQFGEGLMTAEAIEDASAAFKKALIERALTAELGHHLGYPPGAQRPEDETNQRNGKSGKTV LTGDGPLRLDIPRDRDGSFSPILIPKHERRYTGFDDKIIAMYARGMTVREIRAFLLEQYGTDVSHDFISSVTDAVMEEIG AWQQRPLEPMYPVIFFDALRVKIREEGLVRNKAIYLALGVLPDGTRDILGIWIETTEGAKFWMKVFNDLKTRGVEDVLIA VTDGLKGMPEALSAVFPETTLQTCIVHLIRNSLDYAAWDKRRELAKALKPIYQAINAEAAEAALDSFENGPWGKQYPTVV AAWRRAWDRVIPFFVFPPAIRKVIYTTNAIESINAQLRKIIKTRGHFPTDDAATKLIWLGLRNITANWGSAAHDWKSAMN QFAILYGDRFIRPTW |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDHC03_2103 | YP_005139146.1 | transposase-like protein | Not tested | Not named | Protein | 6e-84 | 46 |
| api41 | CAF28515.1 | is285 transposase | Not tested | YAPI | Protein | 2e-94 | 45 |
| tnp7109-23 | YP_001800851.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-85 | 45 |
| tnp7109-31 | YP_001800937.1 | transposase for insertion sequence | Not tested | Not named | Protein | 3e-82 | 44 |
| CPR_0630 | YP_697957.1 | ISCpe3, transposase | Not tested | Not named | Protein | 8e-81 | 43 |
