Gene Information

Name : PSEBR_a435 (PSEBR_a435)
Accession : YP_004351582.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 538001 - 538891 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence :
ATGGAATTGCGACACCTGCGTTACTTCATCGCCGTTGCCGAAGAACTGCATTTCGGCCGTGCCGCGCTGGCCCTGGGCAT
CTCCCAGCCGCCCTTGAGCCAACAGATCCAGGCGCTGGAGCAGGAGATTGGCGCACGGTTGTTCGAGCGTACCAATCGTC
GGGTCGAATTGAGCGAGGCCGGGCGGTTGTTCCTTGAAGAAGCGCGACGGGTATTGGTCCAGGTCGATAAAGCCGCTGAC
GTCGCCCGCCGCGCCCAACTGGGGGAGTTGGGCGAGCTGAAAATCGGCTTCACCTCCTCGGCGCCTTTCAACTCCACCAT
CCCCCAGGCGATTTTTTCATTCCGGCAACGCTTCCCGGCGGTGCACCTGAACCTGCGGGAAATGAGCAGTACCCAAGTGG
CCGACGCACTGGTGGATGAAGAGATCGAGGTGGGCATCATGCGACCCTTGCCGTTGCCCGACTCCTTGGTGGAAATCGAA
CTCAGCCGCGAACCGCTGGTAGCCGTGCTCAGTGCCAAGCATCCCCTGGCCCAGGGCAATGAAGACGGCCTGTTCCTCTC
GGCCTTGGCCCAGGAGCCGTTCGTGTTCTTCCCCCGCAGCTACGGCAGCGGCCTCTATGCCCAGCTCCTGAACCTGGCCC
GCGACGCCGGCTTCAGCCCGCACTTCGCCCAGGAAGCCGGCGAAGCCATGACCATCATCGGCTTGGTGGCGGCGGGGCTG
GGTGTCTCGGTATTGCCGGCGTCTTACCAGCGCATGCGTATCGATGGGGTGGTGTATCGACCGCTACTCGATCCGGCAGC
GGTGTCGGCGGTGTGGCTGGTCCAGCGCAAGGACCAGCGTTCGCCGATGGCGAAGGCGTTTGTGGCGTTGTTGACAGGTA
ATACCGAGTAG

Protein sequence :
MELRHLRYFIAVAEELHFGRAALALGISQPPLSQQIQALEQEIGARLFERTNRRVELSEAGRLFLEEARRVLVQVDKAAD
VARRAQLGELGELKIGFTSSAPFNSTIPQAIFSFRQRFPAVHLNLREMSSTQVADALVDEEIEVGIMRPLPLPDSLVEIE
LSREPLVAVLSAKHPLAQGNEDGLFLSALAQEPFVFFPRSYGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAGL
GVSVLPASYQRMRIDGVVYRPLLDPAAVSAVWLVQRKDQRSPMAKAFVALLTGNTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 7e-51 43