|
Name : PSEBR_a4302 (PSEBR_a4302) Accession : YP_004355714.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2831 EC number : - Position : 5239682 - 5241343 bp Length : 1662 bp Strand : - Note : - DNA sequence : ATGACGGGTGCGTGGAGCGCTGCGCAGGCGGCTGGGCCTGAAGAAGAACTGCTGCGTCAGCAAGAGCGCGAGCGGGTGTT GAGGGAGCAGTTGGAATCCCGGCCGGATGTGCGCCTGCAGGCGGCCCCTGTGGCTGAGGGTGTCGATCGCTTGCCCGCCA AGGAAAGTCCCTGCTTTGCCATCAATGACATCCGTCTGATTGGCGAGGCGTCGGAGAAATTCCAGTGGGCGTTGCGCGCT GCCAACCCCAAGGATGACCCTGCCATCGGTGGTTGCCTCGGCGGTGGCGGGATCAATCTGACGATGAAGCGCATGCAGAA CGCGATCATCGAGGCCGGCTACGTCACCACTCGCGTGCTCGCCGAAGCCCAGGACTTGAACAGCGGGGTTCTGGTCTTGA CCCTGGTGCCGGGGCGCATTCGCGAGATTCGTTTCGAAGAGGGCACCAGCTCCCGCGCCAATGCCTGGAACGCGATGCCG GCCAATCCTGGCGATCTGCTCAACTTGCGCGACATCGAGCAGGCGCTGGAAAACTTCAAGCGTGTGCCGACCGCCGAAGC CGATATCAAGATCGCGCCGGCCCGTGCCGTCGACGCCAAACCCGGTGAGAGCGACGTGGTGATCGCCTGGAGCCAGCGGT TCCCCGCCCGTGTGAGCCTGTCGGTGGACAATTCGGGCAGCAAGACCACCGGTAAATATCAGGGCAACGTGTCGCTGTCA TTGGACAACCTGCTCTCGCTCAACGATTTGCTCTACGCCAGCGTCAACCATGACTTGGGCGGGGGCGAGTCCGGGCACCG TGGCTCCGATGGCCGCACGCTGCATTATTCGCTGCCGTTCGGCTACTGGCAGGTGGGGTTCACCAGCAGTGAATACAACT ACGAACAGTCCGTCGCCGGCACCAACCAGACCTATCAGTACCGGGGCGAGAGTCGTAACAACGAGTTGCGTCTGTCCCGC CTGCTGTACCGCGACGCTGTTCGCAAGACCACCGCCTGGGGCAGCCTCTGGACGCGTTCGTCGGAGAACTTCATCGACGA CACCGAAGTCGGCAACCAGAAACGCCGCATGGCCGGCTGGCAGTTGGGGTTGGATCATCGAGAGTTCATTGGCGCTTCGA TTCTTGACCTGGGTGTCGCCTATCGTCGCGGCACCGGTGCCCACGACTCGCTCAGGGCACCCGAGGAAGATTTTGATGCC GGCACGTCGCGCTCGCAAATCATCACCGCCGACGCCCAACTGCAGGTGCCATTTCAGCTTGGCGATCAGCGACTGCGCTA CATCGGCGGCTGGCGTGCGCAATGGAACCGGACGCCGTTGGTGCCCCAGGATCGTTTCTCGATTGGCGGGCGCTACAGCG TGCGGGGCTTCGATGGTGAAAACATTCTTTCCGCCGACCGTGGCTGGACCCTGCGCAACGAGGTCGGCCTGTCCTTGGGG CAGACCGGCCAGGAGCTCTACACCGGTATTGACTATGGCGAAGTCAGCGGTCAATCCAGTGAGTTCCTGATCGGCCAGCG CCTGGCAGGGGCCGTGGTGGGCATTCGCGGTGGTTACAAGGGCCTGTCCTATGACTGGTCGGTGGGCACGCCGTTGAAGA AACCCGATGGTTTCGAGACGGCCAACGTGACCAGCGCCTTCACCGTCATCTGGTCATTCTGA Protein sequence : MTGAWSAAQAAGPEEELLRQQERERVLREQLESRPDVRLQAAPVAEGVDRLPAKESPCFAINDIRLIGEASEKFQWALRA ANPKDDPAIGGCLGGGGINLTMKRMQNAIIEAGYVTTRVLAEAQDLNSGVLVLTLVPGRIREIRFEEGTSSRANAWNAMP ANPGDLLNLRDIEQALENFKRVPTAEADIKIAPARAVDAKPGESDVVIAWSQRFPARVSLSVDNSGSKTTGKYQGNVSLS LDNLLSLNDLLYASVNHDLGGGESGHRGSDGRTLHYSLPFGYWQVGFTSSEYNYEQSVAGTNQTYQYRGESRNNELRLSR LLYRDAVRKTTAWGSLWTRSSENFIDDTEVGNQKRRMAGWQLGLDHREFIGASILDLGVAYRRGTGAHDSLRAPEEDFDA GTSRSQIITADAQLQVPFQLGDQRLRYIGGWRAQWNRTPLVPQDRFSIGGRYSVRGFDGENILSADRGWTLRNEVGLSLG QTGQELYTGIDYGEVSGQSSEFLIGQRLAGAVVGIRGGYKGLSYDWSVGTPLKKPDGFETANVTSAFTVIWSF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1762 | NP_274762.1 | hemolysin activation protein HecB | Not tested | IHT-C | Protein | 1e-85 | 47 |
| S1 | AAQ19124.1 | putative hemolysin activator HlyB | Not tested | PAI I CL3 | Protein | 1e-81 | 44 |
