Gene Information

Name : PSEBR_a412 (PSEBR_a412)
Accession : YP_004351559.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : ATP-dependent protease, ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1220
EC number : -
Position : 507924 - 509261 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
ATGTCCATGACTCCCCGCGAAATCGTCCACGAACTCAACCGCCATATCATCGGCCAGGACGATGCCAAGCGCGCCGTCGC
CATCGCCCTGCGTAACCGCTGGCGCCGGATGCAACTGCCCGAAGAACTGCGCGTCGAAGTGACCCCCAAGAACATCCTGA
TGATCGGCCCGACCGGTGTCGGTAAAACCGAGATCGCCCGTCGCCTGGCCAAACTCGCCAACGCGCCGTTCATCAAGGTC
GAAGCCACCAAGTTCACCGAAGTCGGCTATGTTGGCCGCGACGTCGAGTCGATCATCCGTGACCTGGCCGATGCCGCCAT
CAAGCTGCTGCGCGAACAGGAAATCACCAAGGTCCGCCATCGCGCCGAAGACGCCGCCGAAGAGCGCATCCTCGACGCCC
TGCTGCCACCGGCGCGCATGGGCTTCAGCGCCGACGCCGCCGCGACCCAGGACTCCAACACCCGTCAACTGTTCCGCAAG
CGCCTGCGCGAAGGCCAGCTGGACGACAAGGAAATCGAGATCGAAGTGGCCGAAATGGCCGGCGTCGATATTTCCGCGCC
GCCAGGCATGGAAGAGATGACCAACCAGCTGCAGAGCCTGTTCGCCAACATGGGCAAGGGCAAGAAGAAAAACCGCAAGC
TCAAGGTCAAGGAAGCGCTGAAACTGGTGCGCGATGAGGAAGCCGGTCGCCTGGTCAACGAAGAAGAGTTGAAGGCCAAG
GCGCTGGAGGCAGTCGAGCAGCATGGCATCGTGTTCATCGACGAAATCGACAAGGTCGCCAAGCGCGGCAATGTCGGCGG
TGCCGATGTGTCCCGCGAAGGTGTACAACGCGACCTGCTGCCGCTGATCGAAGGCTGCACGGTCAACACCAAGCTGGGCA
TGGTCAAGACCGACCACATCCTGTTCATCGCCTCCGGGGCGTTCCACCTGAGCAAGCCGAGCGACCTGGTGCCGGAGCTG
CAGGGTCGCCTGCCGATCCGTGTCGAGCTCAAGGCGCTGACGCCGGAAGACTTCGAGCGCATCCTCAGCGAGCCCCACGC
GTCGCTGACCGAACAGTATTGCGCGCTGCTCAAGACCGAAGGCCTGAACATCGAGTTCACCCCCGAAGGCATCAAGCGTC
TGGCCCAGATCGCCTGGCAGGTCAACGAGAAGACCGAGAACATCGGTGCCCGTCGCCTGCACACGCTGCTCGAACGCTTG
CTCGAGGAAGTCTCGTTCAGCGCCGGCGACCTGGCCAGCGCCCACAACGAAGCGCCGATCCTCATCGACGCCGAGTACGT
CAACAGTCACCTGGGCGAGCTGGCGCAGAACGAAGACCTGTCGCGGTATATCCTGTAA

Protein sequence :
MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELRVEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV
EATKFTEVGYVGRDVESIIRDLADAAIKLLREQEITKVRHRAEDAAEERILDALLPPARMGFSADAAATQDSNTRQLFRK
RLREGQLDDKEIEIEVAEMAGVDISAPPGMEEMTNQLQSLFANMGKGKKKNRKLKVKEALKLVRDEEAGRLVNEEELKAK
ALEAVEQHGIVFIDEIDKVAKRGNVGGADVSREGVQRDLLPLIEGCTVNTKLGMVKTDHILFIASGAFHLSKPSDLVPEL
QGRLPIRVELKALTPEDFERILSEPHASLTEQYCALLKTEGLNIEFTPEGIKRLAQIAWQVNEKTENIGARRLHTLLERL
LEEVSFSAGDLASAHNEAPILIDAEYVNSHLGELAQNEDLSRYIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 9e-85 48