Gene Information

Name : PSEBR_a3881 (PSEBR_a3881)
Accession : YP_004355275.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 4746276 - 4747097 bp
Length : 822 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAGTCTCTATTGAAGAGGTCACCCAAGCCCTGCACGAGTCCCATGGCCGCTACCCACAGGCCAACAGCTTCGAGGA
CTTTCGCCGCAATCTGGCGGCAGTGCAGCAGCGCATTTCCAGCGCCTGCCAGCGTGTCGGTCGTGATCCGGCGAGCGTGC
GCCTGCTGCCGGTGAGCAAAACGTTTGATGAAGCACACCTGCGCCTGGCCTACGTCGCAGGCTGCCGGCTACTGGGCGAG
AACAAGGTGCAGGAAGCGCAGCGCAAACGGGAAGCCATGGCTGATCTGACTGACCTGCAATGGTCGATCATCGGCCACCT
GCAAACCAACAAGGTCAAGCAAGTGGCTCGTTTTGCCAGCGAGTTCCAAGCGCTGGACAGCCTGCGTGTGGCCGAGGCGC
TAGACCGTCGCCTGCAAGTCGAGGGGCGGCGGATGGATGTGTTCGTCCAGGTCAATACCTCGGGGGAGGTCAGCAAGTAC
GGCTTGCCGCCCGAGGCGGTCGCGGCCTTTTTGCGTGCGCTACCTGCGTTCTCGACGCTACGCGTGCGCGGCCTGATGAC
ACTGGCACTGTTCTCGGCCGACGTCGCCCGTGTCCGCCCTTGTTTCGTGCGGCTGCGCGAACTACGCGAGCGCCTGCGCC
AGGACGCCCCGGTCGGTATCGGGCTGGAGGAACTGTCCATGGGCATGTCCGGCGATTTCGAAATCGCCATCGAAGAAGGG
GCGACCGTGGTGCGTGTCGGTCAGGCCATCTTCGGTGCACGCGCCATGCCGGACGCCTATTACTGGCCTACGGCCGATGC
CCGGCCGGCCAGTCACGACTAG

Protein sequence : 
MQVSIEEVTQALHESHGRYPQANSFEDFRRNLAAVQQRISSACQRVGRDPASVRLLPVSKTFDEAHLRLAYVAGCRLLGE
NKVQEAQRKREAMADLTDLQWSIIGHLQTNKVKQVARFASEFQALDSLRVAEALDRRLQVEGRRMDVFVQVNTSGEVSKY
GLPPEAVAAFLRALPAFSTLRVRGLMTLALFSADVARVRPCFVRLRELRERLRQDAPVGIGLEELSMGMSGDFEIAIEEG
ATVVRVGQAIFGARAMPDAYYWPTADARPASHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 52
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-40 52
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 52
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 52