|
Name : PSEBR_a3496 (PSEBR_a3496) Accession : YP_004354836.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)(+)) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 4305386 - 4306843 bp Length : 1458 bp Strand : - Note : - DNA sequence : ATGCTCAAGAATCGATTGAAAGACCCCAGCCTGTTGGCAGAACTCGCTTACATCGACGGCCAGTGGATCGGCGCCGACAA CGCCGCCACCCTTGACGTCATTGACCCGGCCACCGGTCAGGTGCTCGCCCGTGTACCGGCGATGCAAGGCGTGGAAACCC GGCGTGCCATCGAGGCCGCCGAGCACGCCTGGCCGGCGTGGCGCGCGCGTCCGGCGGCGGAGCGGGCAGCGCTGTTGGAG CGCTGGTATCAAGCCATGATGGACAACCTCGACGACCTCGCGCTGATCATGACCTGTGAACAGGGCAAGCCGTTGAACGA AGCCAAAGGTGAAATCCGCTACGGGGCCGGTTTCGCCAAATGGTTTGCCGAAGAGGCCCGTCGGGTCTATGGCGAGACCA TCCCGGCGCCCAGCGGCGACCGACGCCTGCTTACGCTCAAGCAGCCGGTGGGTGTCTGTGCCGCGATCACCCCATGGAAT TTCCCCAATGCGATGATCACCCGCAAGTGCGCACCGGCCTTGGCGGCCGGCTGCCCGGTCATCGTCAAACCCTCGGACCT GACCCCCTTGTCGGCCTTGGCCCTGGCGGTGTTGGCCGAGCGGGTCGGGATTCCGGCCGGCGTGTTCAATGTCGTGACGG GCATGCCGGCCGGTATCGGCGAAGAGCTGACCGGCAACCCGACGGTACGCAAGATTTCCTTTACCGGCTCTACGGCGGTC GGGCGCTTGCTGATGCGCCAGAGCGCCGAGCACATCAAGCGCTTGAGCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGT GTTTGACGATGCAGACCTGGAGCAGGCGGTGGCCGGCATCATGCTCAGCAAGTTTCGCAACGCCGGCCAGACCTGCGTCT GCGCCAACCGCATCCTGGTGCAGGACGGTATCTACGAACGCTTCGCCGCGCGCCTGGTAGAGGAGGTGGGCAAGCTCAAG GTCGGCAATGGGCTGGAGGCTGACGTGATGATCGGCCCGCTGATCAACCTCGCTGCGGTGAACAAAGTCGCCCGGCACAT CGACGATGCGTTGAGCCAGGGCGCGCGTCTGCTCTGTGGCGGTGTTCCCGAGGGCGACAGTCAGTTTGTCCAGCCAACGG TATTGGGGGAGGCCCACGCCGGGATGTTGCTGGCCAACGAAGAAACCTTCGGCCCGGTGGCTCCGCTGATGCGCTTTACT ACTGAGGAGCAGGCCCTGGCCCTGGCCAATGCCACGCCTTATGGCCTGGGCGCTTATTACTTCACCCAGGACCTGCGCCG CTCATGGCGTTTCGGCGAGGCGCTGGAGTTCGGCATGGTCGGGCTCAATACCGGGCTTATCTCCATGGAAGTCGCGCCCT TCGGCGGCATCAAGCAGTCGGGCCTGGGGCGCGAAGGCAGCAAGTACGGCCTGGACGAGTACCTTGAAGTCAAAGCCTTC CACATCGGTGGGTTGTGA Protein sequence : MLKNRLKDPSLLAELAYIDGQWIGADNAATLDVIDPATGQVLARVPAMQGVETRRAIEAAEHAWPAWRARPAAERAALLE RWYQAMMDNLDDLALIMTCEQGKPLNEAKGEIRYGAGFAKWFAEEARRVYGETIPAPSGDRRLLTLKQPVGVCAAITPWN FPNAMITRKCAPALAAGCPVIVKPSDLTPLSALALAVLAERVGIPAGVFNVVTGMPAGIGEELTGNPTVRKISFTGSTAV GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVAGIMLSKFRNAGQTCVCANRILVQDGIYERFAARLVEEVGKLK VGNGLEADVMIGPLINLAAVNKVARHIDDALSQGARLLCGGVPEGDSQFVQPTVLGEAHAGMLLANEETFGPVAPLMRFT TEEQALALANATPYGLGAYYFTQDLRRSWRFGEALEFGMVGLNTGLISMEVAPFGGIKQSGLGREGSKYGLDEYLEVKAF HIGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-133 | 62 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-80 | 43 |
