Gene Information

Name : PSEBR_a3472 (PSEBR_a3472)
Accession : YP_004354808.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Resistance
Product : symporter, permease
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 4278453 - 4280369 bp
Length : 1917 bp
Strand : +
Note : -

DNA sequence :
ATGACCCAAACCAACCGCACTAACCGCTTGGCCACCCTGCGCGGCTCGACAGCATTCAAAGCCTGCATGGGGCTGGCCGC
CTTGCTCACGGCCAGCCAGGGCAACGCCGCCACGCTGGTCTCCGAAGCCAACCGGCCACTGACCTTCGGCGTGTTTGCCG
CGCTGTTCCTGATCACCCTTGGGATTACCTTCTGGGCCGCGCGCAAGAACAGTTCGGTGAAGGATTTCTATACCGCGGGC
GGTGCATTGTCCGGCCGGATCAACGGCCTCGCCATTGCCGGTGATTACCTGTCAGCAGCCGCATTTCTAGGGGTCTCCGG
CCTTATCGCCATCTATGGGTTGGACGGTATAACCTACGTCATCGGCTTCTTTGTATCTTTCATACCGGTGCTACTACTGA
TCGCCGAGCCTTGCCGCAACTTGGGTAAATATACCTTGGGCGATGTGTTGGCGTTTCGTAATAACTTCCGCGCCTCGAAG
TTCGCAGTAGCGATTTCCAGTGTATTGGTCGCGCTCTTTTATATGGTGCCGCAGATCGTTGGCGGCGCCGTGATCATCGC
TGCACTTATCGGTATCCCATTCGAAATATCGGTGGTGTCGGTGGGCGTGCTGATGCTGGTCTACGTGCTGTTTGGCGGCA
TGCGTGCCACCACCTCGGTGCAGATCCTCAAAGCCACCTTGCTGATTGCCTTCTGCTTCCTGTTGGTGGTACTGAGCTGG
GCCCCTTATGGCTTCAACATCAGTGCCTTTTTCAGCGACCTGGTAGGCAGCTCGGCCGTGCAGAAACACGTGCTCGGCAC
CTTGCTCAACGGCGTGTCCCAACTCTCGGCGGAACAAGCCGGGCAACGCTTCATGGAGCCTGGGCTGTACCTGAAGAATC
CGCTGGAACAGATCTCCCTGAGCCTGGCGCTGGTGCTCGGCACGGCGGCCATGCCCCATATCCTGATGCGCTTCTTTACC
GTGCGCGACGCACAAAGTGCCCGTACTTCGGCGCTGACCGCCATGCTGCTGATCGGCCTGTGCCATCTGTTCATCATCGT
CATCGGTTTCTCCGCCGCGCTCCACCTGGGGCCCTTCGCGATTACCACCATGGACAAGGGCGGCAACCTCGCCGCCCCGA
TGCTGGCCCAGTTCCTGGGCGGTGGCGCCGATAGCCTGCTCGGCAACCTGATGCTCGCGTTCGTCGCGGCCGTGTCCTTC
GCAACCATAGTCGCAGTGGTCGCCGGGCTGACGCTGGCAGCAGCCTCCACACTCGCCCATGACGTGTATGTAGGCGCCGT
GCGCCAGGGCAAGGCCACCGAGGGCGAGCAGGCCACCGCAGCCCGCCTGGCGACATTGGCGATCGCCGTCATCGCCATCT
GCGTGGGCATTTCGGCCAAGGGCCAGAACGTCGCGCAACTGGTCGGGCTGGGCTATGCGGTCGCCGCGTCGGCCAACCTT
CCGGCACTGCTGCTGACCCTGTACTGGCGCCGCTGCAGCACCGCTGGCGTGATCGCGGGCTTGCTGGGCGGCACGGTGCT
GTCCATCGGCCTGGTGCTGGTGTCGCCGAATATGAGCTACCCGCTGCAGCAAAAACAGGTGGCGCTGGCCGCAGCCGCTA
AATCCCAAGCCAAAATCGAATTGATCGACAAGGGCGCATTGGTTGCCACCGCCACGGAGCGCGAGCAATTACTCAGCGAT
GTGACCAAGCAACAGGCAACCGCCAGCCTGATCCCGGACTCGGCCACCAGCCTCATCGGCCTGCGTGAGCCATGGGTGCA
GCTGCGCAACCCGGGGTTGATCTCTATCCCGCTCGGCTTTGCCCTGGTCATTCTGTTTTCGCTGCTGTTCCCCAGCCAGC
TGTCGCTGTCGCGCTGGGTGGAGTTTTCCGTGCGCCGCGAGACCGGCCTGGGCGTCGCACAAGCGGCTCAACACTAA

Protein sequence :
MTQTNRTNRLATLRGSTAFKACMGLAALLTASQGNAATLVSEANRPLTFGVFAALFLITLGITFWAARKNSSVKDFYTAG
GALSGRINGLAIAGDYLSAAAFLGVSGLIAIYGLDGITYVIGFFVSFIPVLLLIAEPCRNLGKYTLGDVLAFRNNFRASK
FAVAISSVLVALFYMVPQIVGGAVIIAALIGIPFEISVVSVGVLMLVYVLFGGMRATTSVQILKATLLIAFCFLLVVLSW
APYGFNISAFFSDLVGSSAVQKHVLGTLLNGVSQLSAEQAGQRFMEPGLYLKNPLEQISLSLALVLGTAAMPHILMRFFT
VRDAQSARTSALTAMLLIGLCHLFIIVIGFSAALHLGPFAITTMDKGGNLAAPMLAQFLGGGADSLLGNLMLAFVAAVSF
ATIVAVVAGLTLAAASTLAHDVYVGAVRQGKATEGEQATAARLATLAIAVIAICVGISAKGQNVAQLVGLGYAVAASANL
PALLLTLYWRRCSTAGVIAGLLGGTVLSIGLVLVSPNMSYPLQQKQVALAAAAKSQAKIELIDKGALVATATEREQLLSD
VTKQQATASLIPDSATSLIGLREPWVQLRNPGLISIPLGFALVILFSLLFPSQLSLSRWVEFSVRRETGLGVAQAAQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-51 43
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 6e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a3472 YP_004354808.1 symporter, permease BAC0570 Protein 2e-45 43