Gene Information

Name : PSEBR_a3317 (PSEBR_a3317)
Accession : YP_004354637.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 4101232 - 4102713 bp
Length : 1482 bp
Strand : +
Note : -

DNA sequence :
ATGCCTGCTTCATCCAGCGCTCAAACCAGCGAGAGCACGACCCAGACCCTGTCCCTGCTGGACAAGATCATCGCCGAAGG
CCGCATGGCCCACGACGACAGCCAGCAAGATTACGCCCGCGACATGCTGGCCGAATTCGCCACCCAGGTCCTCGACGAAG
GCATGGCCATCGACAAGGACACCGTGGCGATGATCAACGACCGCATCAGCCAGATCGACCAGTTGATCAGCGCCCAGCTA
AACGAAGTGCTGCACCACCCCGACCTGCAGAAACTCGAAGCCTCCTGGCGCGGCCTGCACCTGCTGGTGCAGAACACCGA
GACCAGCACCCGGCTCAAATTGCGCCTGCTCAACGTCACCCAGAAAGAACTGCAGAACGATCTGGAAAAAGCCGTCGAAT
TCGACCAGAGCGCGCTGTTCAAGAAAATCTACGAGGAAGAATACGGCACCTTCGGCGGGCATCCGTTCAGTCTGCTGGTG
GGCGACTACACCTTTGGCCGGCATCCCCAGGACATCGGCCTGCTGGAAAAACTCTCGAACGTCGCCGCCGCCGCACATGC
CCCGTTCATTGCCGCGGCCAGCCCGCGGTTGTTCGACATGACCAGCTTCACCGAACTGGCGATCCCCAGGGACCTGTCGA
AGATTTTCGAAAGCCAGGAGCTGATCAAGTGGCGCGCCTTCCGTGAAAGCGAAGACTCGCGCTACGTATCCCTGGTGCTG
CCGCACTTCCTGCTGCGCCTGCCATACGGCCCGGACACGCTGCCGGTGGAAGGCATCAACTACGTCGAAGACGTCAACGG
CACCGACCACAGCAAATACCTGTGGGGCAACGCCGCCTGGACCCTGGCGCAACGCATCACCGAAGCCTTCGCCAAATATG
GCTGGTGCGCAGCCATTCGCGGGGCCGAGGGCGGTGGCGCGGTCGAAGGCCTGCCGGCCCATACGTTCCGCACCAGTTCC
GGGGATCTGTCGCTCAAATGCCCGACCGAAGTGGCAATCACCGACCGCCGTGAAAAGGAACTCAACGACCTGGGCTTCAT
CTCCCTGTGCCACAAGAAAAACAGCGACGTGGCGGTGTTCTTCGGCGGCCAGACCACCAACAAGGCCAAGGCCTACAACA
CCAACGAGGCCAACGCCAACGCGCGGATCTCGGCGATGTTGCCATACGTGCTCGCGGCCTCGCGCTTCGCCCATTACCTG
AAGGTGATCATGCGTGACAAGGTCGGCAGTTTCATGACCCGCGACAACGTGCAGACCTACCTCAACAACTGGATCGCCGA
CTACGTGCTGATCAACGACAACGCGCCGCAAGAGATCAAGGCGCAGTACCCGTTGCGCGAAGCACGGGTGGACGTGACGG
AAGTGGCCGGCAAGCCAGGGGCCTACAAGGCCACGGTGTTCCTGCGGCCGCACTTCCAGCTGGAGGAGCTGACCGCCTCG
ATCCGCCTGGTGGCGACCCTGCCGCCACCGGTAGCTGCCTGA

Protein sequence :
MPASSSAQTSESTTQTLSLLDKIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDKDTVAMINDRISQIDQLISAQL
NEVLHHPDLQKLEASWRGLHLLVQNTETSTRLKLRLLNVTQKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLV
GDYTFGRHPQDIGLLEKLSNVAAAAHAPFIAAASPRLFDMTSFTELAIPRDLSKIFESQELIKWRAFRESEDSRYVSLVL
PHFLLRLPYGPDTLPVEGINYVEDVNGTDHSKYLWGNAAWTLAQRITEAFAKYGWCAAIRGAEGGGAVEGLPAHTFRTSS
GDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAVFFGGQTTNKAKAYNTNEANANARISAMLPYVLAASRFAHYL
KVIMRDKVGSFMTRDNVQTYLNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYKATVFLRPHFQLEELTAS
IRLVATLPPPVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-89 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 4e-89 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a3317 YP_004354637.1 hypothetical protein VFG2070 Protein 9e-112 51
PSEBR_a3317 YP_004354637.1 hypothetical protein VFG2475 Protein 6e-96 42
PSEBR_a3317 YP_004354637.1 hypothetical protein VFG2093 Protein 3e-95 41