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Name : PSEBR_a3292 (PSEBR_a3292) Accession : YP_004354611.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 4071570 - 4073180 bp Length : 1611 bp Strand : + Note : - DNA sequence : ATGAACCAGGACAATCTGATCGAAGTACGCGACCTGGCGGTGGAGTTCATTGTCGGCGAACGCCGCCAGCGCGTGGTCGA GGGGGTCAGCTTCGATATCAAGCGCGGCGAAACCCTGGCCCTGGTGGGTGAAAGCGGCTCGGGCAAATCGGTTACCGCCC ATTCGATCCTGCGGTTGCTGCCTTACCCGCTGGCCCATCACCCCACCGGGACCATCCAGTACGCCGGCCAGAATTTGCTG GGTTTGAAGGAAAAAACCATCCGTCATATCCGCGGCAACCGGATCGCGATGATTTTCCAGGAGCCGATGACATCCCTCAA CCCGCTGCACTCCATTGAAAAACAGATCAATGAAGTGCTCGGCATCCACAAGGGCCTGAGCGGCAAGGTCGCGACCCGCC GGACCCTTGAGTTGCTGGAGCTGGTTGGCATTCCCGAACCCCACAAGCGCCTCAAGGCCCTGCCCCACGAGCTATCCGGC GGCCAGCGCCAGCGGGTGATGATCGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATTGCCGACGAGCCGACCACCGC GCTGGACGTCACCGTCCAGTTGAAAATCCTCCAATTGCTCAAGGAATTGCAGGCGCGATTGGGCATGTCGCTGCTGCTGA TCAGCCACGATTTGAACCTGGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCGGTTGCATCGTCGAACAGGCA TCGTGCGAAGAGTTGTTCCGGGCACCGCAGCATCCGTACACTCGGGAACTGCTGGGCGCTGAACCCAGCGGCACCCCGGC GAGCAACGTCGTCGGCCCGCCGCTGTTGCAGGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGTTCAAGC GCACGGTAGACTACATCAAGGCCGTGGACGGTATCCGCTTCAGCCTGCCCCAGGGCCAGACCCTGGGCATCGTCGGCGAA AGCGGTTCCGGCAAATCCACCCTGGGGCTGGCAATCCTGCGGTTGATCGGCAGCCAGGGCGGGATCCGTTTCGAAGGCAA GCAGCTGGATAGCCTGACGCAGCAACAAGTCCGGCCGCTACGCCGGGAGATGCAAGTGGTGTTTCAGGACCCGTTTGGCA GCCTGAGCCCACGGATGTGTGTGAGCCAGATCGTCGGCGAAGGCCTGCGGATCCACAAGATCGGCACCGAAGCCGAACAG GAACAAGCGATAATAGCGGCATTGAAGGAGGTAGGCCTGGACCCGGAAACCCGGAACCGCTACCCCCATGAATTTTCCGG AGGGCAACGGCAGCGTATCGCCATTGCCCGGGCCCTGGTGCTCAAGCCGGCGTTGATTCTGCTGGATGAACCGACGTCGG CCCTGGACCGTACCGTGCAACGCCAAGTGGTGGAGCTGTTGCGGTCGTTGCAAACCAAGTACAACCTGACGTACCTGTTT ATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGTTGATGGTGGTCAAGCATGGCCAAGTGGTCGAACAAGG TGATGCCCGCAGCATATTCGCCGCGCCGCAGCACCCCTATACACAGCAGTTGCTGGAGGCCGCCTTCCTGGCCCCAACAA CTGCCGAATAA Protein sequence : MNQDNLIEVRDLAVEFIVGERRQRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLAHHPTGTIQYAGQNLL GLKEKTIRHIRGNRIAMIFQEPMTSLNPLHSIEKQINEVLGIHKGLSGKVATRRTLELLELVGIPEPHKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILQLLKELQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQA SCEELFRAPQHPYTRELLGAEPSGTPASNVVGPPLLQVEDLKVWFPIKKGLFKRTVDYIKAVDGIRFSLPQGQTLGIVGE SGSGKSTLGLAILRLIGSQGGIRFEGKQLDSLTQQQVRPLRREMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKIGTEAEQ EQAIIAALKEVGLDPETRNRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQTKYNLTYLF ISHDLAVVKALSHQLMVVKHGQVVEQGDARSIFAAPQHPYTQQLLEAAFLAPTTAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-90 | 42 |
