Gene Information

Name : PSEBR_a3232 (PSEBR_a3232)
Accession : YP_004354546.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : type II secretion pathway protein G , pseudopilin
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3993997 - 3994446 bp
Length : 450 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGATTGCCCGTTACAAAGCCCGTTTCCCAGGCCCTCGCGGGCAGTCGGGTTTCACCCTGATCGAAATCATGGTCGT
GGTGGTGATCCTCGGCATCCTGGCGGCGATGGTGGTGCCCAAGGTACTCGACCGCCCTGACCAGGCGCGGGCAACGGCGG
CGAAACAGGACATTGGCGGCCTGATGCAAGCCCTGAAGCTGTATCGCCTGGACCACGGCAGTTACCCGAGCATGAACCAG
GGCCTCAAAGTGCTGGTGGAAAAGCCCGCCGATGCGAAAAACAGCACCTGGCGCTCTTATCTGGAGCGCCTGCCCAACGA
CCCATGGGGCCGTCCATATAACTACCTCAACCCGGGTGCCAACGGCGAAGTCGATATCTTTTCCCTGGGGGCCGACGGTC
AGCCTGACGGCGACGGCGTGAATGCCGACATTGGCTCCTGGCAGTTGTAA

Protein sequence : 
MQIARYKARFPGPRGQSGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGSYPSMNQ
GLKVLVEKPADAKNSTWRSYLERLPNDPWGRPYNYLNPGANGEVDIFSLGADGQPDGDGVNADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 7e-33 50
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-32 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a3232 YP_004354546.1 type II secretion pathway protein G , pseudopilin VFG1871 Protein 4e-40 60
PSEBR_a3232 YP_004354546.1 type II secretion pathway protein G , pseudopilin VFG0180 Protein 4e-36 58
PSEBR_a3232 YP_004354546.1 type II secretion pathway protein G , pseudopilin VFG2050 Protein 2e-33 50