|
Name : PSEBR_a3041 (PSEBR_a3041) Accession : YP_004354351.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : transport system membrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 3757402 - 3758703 bp Length : 1302 bp Strand : + Note : - DNA sequence : ATGATGACCACCATGACGCTCGACGCTGTGTCCACAGTACGCTCCAGCGCGTATCGCAAAACTGCCTGGCGATTGATGCC TTTCCTGATGCTGTGCTACCTGTGCGCTTACCTGGACCGGGTAAATGTCGGGTTTGCAAAGCTGCAGATGATGAACGACC TGTCCCTGAGCGAAACCGTATACGGGCTCGGCGCGGGCATGTTCTTTCTTGGTTATTTTCTCTGCGAAGTGCCAAGCAAC CTCATCCTCCACAAGGTCGGTGCCCGTCGCTGGATCGCGCGCATCATGATTTCGTGGGGCATCATCTCCGCCCTCTTCGC CTTCGTAGAAACGGCCTGGCAGTTCTATACGCTGCGCTTTCTGCTCGGTATCGCCGAAGCCGGTCTCGCGCCGGGCTTGC TGCTCTACCTCACTTACTGGTTCCCCTCCTACCGCCGCGCAAAAATGACCGTGCTGTGGTTCATCGCGATCCCGCTCTCA GGAATGATCGGCGGGCCGCTCTCAGGCTACATCATGACCCAATTCGCAGGTTTTCAAGGCTGGGCGGGCTGGCAGTGGAT GTTCGTGATCGAAGCCATTCCGACCGTCGTCGTTGGCCTGATGGTGCTGGCCTACCTCAAAGATGGCGTCCACCAGGCGA CATGGCTCACCGATGAAGAAAAAACGCTGATCAGCAAAGAACTGGCCGAGGACAACAGCCGCAAAGTCACCCATGCATCG GTCGGGGCGTTCCTGCGGGACCGTCGCCTGTGGATTCTCGCCTGCATCTACTTTTGCGTGGTCATGGGCCAGTACGCGAT CACCTTTTGGCTGCCGACGCTTATCCGTAACGCAGGCGTAGCCGATCCGATGCACATCGGCTTGCTCACCAGTCTCCCCT ACCTGTGCGCCATCGTCGCGATGGTGCTGATGGGGCGTAGCGGCGACAAGCACCAGGAGCGCCGCTGGCACCTGGTCGGG CCAATGATTGCCGGCGCGCTGGGCCTCACGTTGGCGGCGGTGTTCGGCACCAACCTGATGCTGTCGGTGTTGTGCCTGTG CCTTGCAGCAGCAGGCGTGCTGTCGGCGTCGTCACTGTTCTGGATGCTGCCTACCACATTGCTCGGTGGCGTCTCCGCCG CTGCGGGGATCGCCGGCATCAACAGCTTTGCCAATCTCGCGGGGTTCTGCTCGCCCTACCTGATTGGTTGGATCACCACC ACAACCGGTTCGAGCGCCATCGGCATGTACCTGATTACCGGTGTGCTGTGCATCGGTGCCTGTCTGGTGCTGCGTATTCC TGCCGCTTCGGTCAATCGTTGA Protein sequence : MMTTMTLDAVSTVRSSAYRKTAWRLMPFLMLCYLCAYLDRVNVGFAKLQMMNDLSLSETVYGLGAGMFFLGYFLCEVPSN LILHKVGARRWIARIMISWGIISALFAFVETAWQFYTLRFLLGIAEAGLAPGLLLYLTYWFPSYRRAKMTVLWFIAIPLS GMIGGPLSGYIMTQFAGFQGWAGWQWMFVIEAIPTVVVGLMVLAYLKDGVHQATWLTDEEKTLISKELAEDNSRKVTHAS VGAFLRDRRLWILACIYFCVVMGQYAITFWLPTLIRNAGVADPMHIGLLTSLPYLCAIVAMVLMGRSGDKHQERRWHLVG PMIAGALGLTLAAVFGTNLMLSVLCLCLAAAGVLSASSLFWMLPTTLLGGVSAAAGIAGINSFANLAGFCSPYLIGWITT TTGSSAIGMYLITGVLCIGACLVLRIPAASVNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-170 | 91 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-170 | 91 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-170 | 91 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 6e-171 | 91 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 7e-170 | 91 |
