Gene Information

Name : PSEBR_a2799 (PSEBR_a2799)
Accession : YP_004354102.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 3462842 - 3463342 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTCACCCTCAAAGGCAACCCGGTCCAAGTCAACGGCCAGTTGCCACAAGCCGGTTCCAAGGCGCCAGCCTT
TTCCCTGGTTGCCGGCAATCTGTCGGACGTTTCCCTGAAGGACTTCGCCGGCAAGCGCAAAGTGCTGAACATTTTCCCAA
GTGTCGACACGCCGACCTGCGCCACCTCCGTGCGCAAGTTCAATGCCCAGGCCAACGGCCTGACCAACACTGTGGTGCTG
TGCATCTCCGCCGACCTGCCGTTTGCCCAGGCGCGTTTCTGCGGTGCCGAAGGCCTGGAAAACGTCCAGAACCTGTCGAC
CCTGCGCGGTGCCGAGTTCATCCAGGACTACGGCGTGGCAATCGCTGATGGCCCGCTCAAAGGCCTGACCGCCCGTGCCG
TGGTGGTGCTGGACGAAAACGACACCGTGCTGCACAGCGAGCTGGTCAAGGAAATCGGTGAAGAGCCAAACTACGACGCT
GCGTTGGCCGTTCTGAAATAA

Protein sequence : 
MAQVTLKGNPVQVNGQLPQAGSKAPAFSLVAGNLSDVSLKDFAGKRKVLNIFPSVDTPTCATSVRKFNAQANGLTNTVVL
CISADLPFAQARFCGAEGLENVQNLSTLRGAEFIQDYGVAIADGPLKGLTARAVVVLDENDTVLHSELVKEIGEEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-36 47
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 47
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-36 46
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a2799 YP_004354102.1 peroxiredoxin VFG0087 Protein 4e-37 47