Gene Information

Name : PSEBR_a2666 (PSEBR_a2666)
Accession : YP_004353963.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase NAD(+)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3312998 - 3314518 bp
Length : 1521 bp
Strand : +
Note : -

DNA sequence :
ATGATCTATGCACAACCCGGAACCCCAGGCGCCGTCGTTTCCTTCAAGCCGCGCTATGGCAACTTCATCGGCGGCGAATT
CGTCGCGCCGGTCAACGGCGAATACTTCACGAACACGTCCCCGGTCAATGGCGAAGTCATTGCCGAATTCCCACGCTCCA
GCGCCGCCGACATCGACAAGGCCCTGGATGCCGCCCATGCCGCAGCCGATGCCTGGGGCAAGACCTCGGTGCAGGACCGT
TCCCTGGTGCTGTTGAAAATCGCCGACCGTATCGAGCAGAACCTGGAAATCCTCGCCGTCAGCGAAACCTGGGACAACGG
CAAGGCCGTGCGCGAAACCCTCAATGCCGACGTGCCGCTGGCGGCCGACCATTTCCGTTATTTCGCCGGCTGCATCCGCG
CCCAAGAGGGTGGGGCGGCCGAGATCAACGAACTGACCACGGCCTATCATTTCCACGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAACTCGCCCCGGCCCTGGCTGCCGGTAACTGCGTCGTGCT
CAAGCCGGCTGAACAGACGCCGCTGTCGATCATGGTCTTCATCGAGCTGGTCGCTGACCTGCTGCCGCCAGGGGTGTTGA
ACATCGTCCATGGTTTCGGTCGCGAAGCCGGTGAAGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCCACCCCGGTGGGCTCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCCACCGTGGAACTGGGTGGCAAGTC
GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCGGCCTTCATCGAGAAAGCCGCCGAAGGCCTGGTGCTGGCGT
TCTTCAACCAGGGCGAAGTCTGCACCTGCCCGTCCCGGGCGCTGGTGCAGGAGTCGATCTACGAATCGTTCATGGCCGTA
GTCATGAAGAAAATCGCCAAGATCAAGCGCGGCGACCCGCTGGACACCGAGACCATGGTTGGCGCCCAGGCCTCCGAGCA
GCAGTACGACAAGATCCTCTCGTACCTTGAAATTGCCCAGCAAGAGGGCGCCGAGCTGCTCACCGGCGGTGCTGCCGAGC
GACTCGAGGGGGATCTGTCGAGCGGCTATTACATCCAGCCGACCCTGCTCAAGGGCCACAACAAAATGCGTGTGTTCCAG
GAAGAAATCTTCGGCCCGGTAGTGGGTGTGACCACCTTCAAGGACGAAGCCGAAGCCCTGGCCATTGCCAACGACACCGA
GTTCGGCCTCGGCGCCGGCCTGTGGACTCGCGACATCAACCGCGCCTACCGCATGGGCCGGGCGATCAAGGCCGGTCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCACGCCGCGTTCGGTGGCTACAAGAAGTCCGGCGTGGGGCGTGAAACC
CACAAAATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGTTGGGGTTCTTCTA
A

Protein sequence :
MIYAQPGTPGAVVSFKPRYGNFIGGEFVAPVNGEYFTNTSPVNGEVIAEFPRSSAADIDKALDAAHAAADAWGKTSVQDR
SLVLLKIADRIEQNLEILAVSETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGGAAEINELTTAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSIMVFIELVADLLPPGVLNIVHGFGREAGEALATSKRIAKIAFTG
STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYESFMAV
VMKKIAKIKRGDPLDTETMVGAQASEQQYDKILSYLEIAQQEGAELLTGGAAERLEGDLSSGYYIQPTLLKGHNKMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEFGLGAGLWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-148 67
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-156 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-156 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-156 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-155 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a2666 YP_004353963.1 aldehyde dehydrogenase NAD(+) VFG0082 Protein 7e-149 67