|
Name : PSEBR_a240 (PSEBR_a240) Accession : YP_004351378.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Resistance Product : heavy metal-exporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 312286 - 314505 bp Length : 2220 bp Strand : - Note : - DNA sequence : ATGAGCGATTCCCTTCACATCCACAAACCCGACCACGGCCATGACCACGGGCATTCCTGCTGCGCATCGAAAGCAGCCCC GTCGCAGGTCATCCTCGACAAAACGCCGACGGACGGTGCGCGGCTGAGCAGTTTCCGCATCGAAGCCATGGACTGCCCCA CCGAACAGACGCTGATCCAGAACAAGCTCGGCAAGCTCGAAGGCGTGCAGCAACTGGACTTCAACCTGATCAACCGCGTG CTGGGCGTGACCCATGATTTGCCTAGCGACGCGCCCATCATCAAGGCCATCGAATCCTTAGGGATGCAGGCCGAGCCGAT GACGCCAGGCAAAGAGAAAGCCACCCCTGACTTGCCCGCCCCGGCCAAGCCCTGGTGGCCGCTGGCGCTGTCCGGCGTGA CGGCCCTGGGTGCCGAGTTGATCCACTTCACCAGCGCCGCGCCAAACTGGGTGGTCGCGCTGGTGGCGTTGGTGTCGATC CTCAGCGGCGGCCTGGGTACCTACAAGAAGGGCTGGATCGCCCTGAAAAACCGCAACTTGAACATCAACGCGCTGATGAG CATCGCCGTGACCGGCGCCGTGTTGATCGGCCAATGGCCGGAAGCGGCGATGGTGATGTTCCTGTTCACCGTGGCCGAGC TGATCGAAGCCAAATCCCTCGATCGGGCGCGCAACGCCATCAGTGGCCTGATGCAGATGGCCCCGGAACAGGCCACCGTG CAACAGGCCGATGGCAGCTGGCAGGCGCAAGACGTAAAAGTCATCGCCCTCGGTGCGCGGGTACGGGTTCGCCCGGGCGA AAGGGTTGGCCTGGACGGCGACGTGGTCGCCGGTCGTTCGACCATTGACCAGGCACCGATCACGGGCGAGAGCCTGCCGG TGGAAAAAACCATCGGCGACAAGGTGTTTGCCGGCACCATCAACCAGGCCGGCGAATTGGAATACACCGTGACCGCGGCA GCCGATCACTCCACCCTGGCGCGAATCATCCACGCCGTGGAACAGGCCCAGGGCTCCCGCGCGCCGACCCAGCGCTTCGT CGACCAGTTCTCGAAAATCTACACCCCGGCGGTGTTTGTCCTGGCCCTGGCTGTAGCCATCATCCCACCGCTGTTCATGG GCGCGGCGTGGTTCGACTGGATCTACCGGGCGCTGGTGCTGCTGGTGGTCGCTTGCCCGTGCGCACTGGTGATTTCCACC CCCGTGACCATCGTCAGCGGCCTCGCCGCCGCTGCGCGCAAAGGCATCCTGGTCAAGGGCGGCGTGTACCTGGAGGGCGG CTACAAGCTCGACTACCTGGCCTTGGACAAGACCGGCACGATCACCCACGGCAAGCCGGTGCAAACCGACTATGTGGCGC TGGACCCGAGCGTGGAAACCACCGCTCCGGCCCTGGCCGCCAGCCTCGCTGCCCGCTCCGACCACCCGGTTTCCCGGGCG ATTGCCAACGCGGCTGTGGATAAACAACTGACACAGCAGGTTGTGGATAACTTCGAGGCGCTTGCCGGGCGCGGCGTGCG CGGCGACATCGGCGGGCAGACTTATCACCTGGGCAATCACCGCCTCGTGGAAGACCTCGGCCTGTGCTCGCCCGAACTGG AAGAGAAACTCTTCGCCCTGGAAAAACAAGGCAAGTCCGTGGTGCTGCTGCTCGACGCTACAGGCCCGTTGGCGCTGTTT GCCGTGGCCGACACCGTGAAGGACTCCAGCCGCGAGGCCATCCGGCAACTGCATGGCCTGGGCATCAAGACCTTGATGCT CACCGGCGACAACGCCCACACCGCCGACGCGATTGCCGCGCAGGTAGGCATGGACCAGGCTCGGGGCGACCTGCTGCCCG AAGACAAGCTGCAAGCCATCGAAGCGTTGTACGCCCAGGGTCACCGCGTCGGCATGGTCGGCGACGGCATCAACGACGCC CCGGCCCTGGCCCGTTCGGAAATCGGTTTCGCCATGGCGGCGGCCGGCACCGACACGGCCATCGAAACCGCCGATGTCGC CTTGATGGACGATGATCTGCGCAAGATCCCGGCTTTCATTCGCCTGTCGCGGCAGACTTCAAGCATCCTGAAACAGAACA TTGCCTTAGCGTTGGTGATCAAGGCGATCTTCCTCGGGTTCACCTTCGCCGGGTTCGCCACCATGTGGATGGCGGTGTTC GCCGACATGGGGGTGAGTTTGCTGGTGGTGTTCAATGGGTTGCGGTTGTTGCGCAAATGA Protein sequence : MSDSLHIHKPDHGHDHGHSCCASKAAPSQVILDKTPTDGARLSSFRIEAMDCPTEQTLIQNKLGKLEGVQQLDFNLINRV LGVTHDLPSDAPIIKAIESLGMQAEPMTPGKEKATPDLPAPAKPWWPLALSGVTALGAELIHFTSAAPNWVVALVALVSI LSGGLGTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVMFLFTVAELIEAKSLDRARNAISGLMQMAPEQATV QQADGSWQAQDVKVIALGARVRVRPGERVGLDGDVVAGRSTIDQAPITGESLPVEKTIGDKVFAGTINQAGELEYTVTAA ADHSTLARIIHAVEQAQGSRAPTQRFVDQFSKIYTPAVFVLALAVAIIPPLFMGAAWFDWIYRALVLLVVACPCALVIST PVTIVSGLAAAARKGILVKGGVYLEGGYKLDYLALDKTGTITHGKPVQTDYVALDPSVETTAPALAASLAARSDHPVSRA IANAAVDKQLTQQVVDNFEALAGRGVRGDIGGQTYHLGNHRLVEDLGLCSPELEEKLFALEKQGKSVVLLLDATGPLALF AVADTVKDSSREAIRQLHGLGIKTLMLTGDNAHTADAIAAQVGMDQARGDLLPEDKLQAIEALYAQGHRVGMVGDGINDA PALARSEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFIRLSRQTSSILKQNIALALVIKAIFLGFTFAGFATMWMAVF ADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 66 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 6e-118 | 47 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 3e-116 | 46 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 3e-116 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEBR_a240 | YP_004351378.1 | heavy metal-exporting ATPase | BAC0298 | Protein | 0.0 | 67 |
