Gene Information

Name : PSEBR_a2427 (PSEBR_a2427)
Accession : YP_004353710.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein fliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3031189 - 3031911 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
ATGACTCGCCGCATGCTGTTCCTGGTGCTCAGCGGCTTTGCTCCCTTCGCGGCTGCTGCGGATGACTTCTCTGAATGGGG
AAGTTTGCACATCAATCAGATCCAATCGCCGGTCAGCATTGTGGCTTTGCTGACGGCGCTGTCGTTCCTGCCCTTTTTGG
TCATTTCCCTGACCACGTTCACCCGCAACATCGTGGTGTTGTCATTGGCAAGGCAGGCATTGGGGCTGCAACAGACGCCG
CCGAATATCGTGTTGATCGTACTGTCGATGTTCTTGACGTTATTTGCCATGGCTCCAACCCTGGAAAAGGCCTATGACGC
TGGCATCAAGCCATTCCTGGCGAACAAAGTAGGGCTTGACGGCGCTGCGTTGCAAGGGTGGGTGCCGATCCGCGATTTCA
TGATCAGGCAGACCCATGAAGAGGATTTGCGACTGATTTATGAGTTGGCCAAGGATCCGCTGCCGCAAGCGCCGGAAGGG
CTGTCCCCGGTAAAGCTGGTGCCGGCATTCATGTTGAGTGAGCTGAAACTGGCCTTTCAGATCGGCTTCATGATCTTCCT
GCCATTCTTGATCATCGATCTGGTGGTGGCGTCAATTCTGATGTCGTTGGGGATGATCATGGTGCCCCCCATCACGATTT
CTTTGCCATTGAAGATCATGCTGTTTCTGTTGATCGACGGTTGGGGCCTGATTGCCCAGACGTTGATGCGCAATCTCGGC
TAG

Protein sequence : 
MTRRMLFLVLSGFAPFAAAADDFSEWGSLHINQIQSPVSIVALLTALSFLPFLVISLTTFTRNIVVLSLARQALGLQQTP
PNIVLIVLSMFLTLFAMAPTLEKAYDAGIKPFLANKVGLDGAALQGWVPIRDFMIRQTHEEDLRLIYELAKDPLPQAPEG
LSPVKLVPAFMLSELKLAFQIGFMIFLPFLIIDLVVASILMSLGMIMVPPITISLPLKIMLFLLIDGWGLIAQTLMRNLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-27 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a2427 YP_004353710.1 flagellar biosynthetic protein fliP VFG2494 Protein 2e-47 52
PSEBR_a2427 YP_004353710.1 flagellar biosynthetic protein fliP VFG2338 Protein 4e-45 51
PSEBR_a2427 YP_004353710.1 flagellar biosynthetic protein fliP VFG1259 Protein 2e-45 50
PSEBR_a2427 YP_004353710.1 flagellar biosynthetic protein fliP VFG2016 Protein 2e-41 45