|
Name : PSEBR_a2332 (PSEBR_a2332) Accession : YP_004353615.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : transporter membrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 2879808 - 2881190 bp Length : 1383 bp Strand : + Note : - DNA sequence : ATGCAAACCATCTCCGAGCAGTTGCCCGCGCAGGCTCCCGCCTGCGAATTGGATTTCGAAGACCGGACCTACCGCAAGGT CATCTGGCGCATCCTTCCGGTCCTGCTGTTGTGCTACATGGCGGCGTACCTCGATCGGGTGAACATAGGGTTCGCCAAGC TCGACATGCTCAACGAGCTGCAGTTCAGCAACACCGTATATGCCTTGGGCGCCAGTATGTTTTTCTGGGGCTATTTCCTC TTCGAAGTCCCCAGCAACCTGTTGCTGCATCGCTTTGGCGCGCGGTTCTGGATTGCCCGGATCATGCTGACCTGGGCGGT GGTGTCCATGGCCGTGGCCTACACCGTGCCGCTGGCGGCTTTCTTCCACCTCGAATCGAGCACGATGTTCTATGTGCTGC GTTTCCTGTTGGGCATCTGTGAAGCGGGCTTCTTCCCTGGCGTGATCCTGTACCTCAACTACTGGTTCCCGACCCATCGG CAGAGCCGGGTGATGTCCGGGTTCCTGCTGGCGTTGCCGGTCAGCCTGACCCTGGGCGGGATACTCTCCGGTTGGCTGAT GAACAGCATGCAAGGGGTGCATGGCCTGTCTGGCTGGCAATGGATGTTGCTGATCGAAGGCATTCCTTCGATCATCATGG CGTTCGTGGTGATCGTCTGCCTGGCCGACAACATCGACAAAGCCAAATGGCTTTCTGTCGCGGAAAAAGCCCTGCTCAAG GCCAACCTGCAAACCGACAACCAGGGCAAGGCCACGCGCTTGAGCGAAGTGTTCCTCAACCCCCGGGTGTGGTTGCTGGT ATTGATCCTGCTGACCTTCAACACCGGCTTCTATGGCCTGGCGTTCTGGATGCCGTCGATCATCAAGAGCACCGGCATCA CCAACAGCTTGCACATCGGTTTGCTGACCGCCATTCCTTACTCGGTGGCAGTGGTGGCGATGCTGCTCAACGCCCGGCAC TCCAACCGCACCGGTGAGCGGCGCCTGCACGCGGCAATTCCGGCGTTCATTGGCGGCGCCGGCCTGATCCTCAGCGCGTT CTTCGCCGACAACCTGGTGTTGTCCGTGCTCTTTCTCAGCGTCTCCGCTTCGGGGATCCTCAGTCTGATGCCGATTTTCT GGACCCTGCCGGGCACCGTGCTGTCGGGCGTCGCCGCCGCAGCCGGGATTGGCATGATCAACGCCATCGGCAACCTGTCG GGTTTCACCGGTTCGATGATCACCGCCGTGGCCGAGACCCTCACGGGCAACATCAACAACGGCACCTATGTACTAGCCTT GTGTCTTTTGGTCAGCGGTGGACTGATCCTGGCCATTCCCGCCTCAATGCTCGGCAGGACACCCAAGCACGCCACCACGG CAGCCCAACTGGAGACCGCATGA Protein sequence : MQTISEQLPAQAPACELDFEDRTYRKVIWRILPVLLLCYMAAYLDRVNIGFAKLDMLNELQFSNTVYALGASMFFWGYFL FEVPSNLLLHRFGARFWIARIMLTWAVVSMAVAYTVPLAAFFHLESSTMFYVLRFLLGICEAGFFPGVILYLNYWFPTHR QSRVMSGFLLALPVSLTLGGILSGWLMNSMQGVHGLSGWQWMLLIEGIPSIIMAFVVIVCLADNIDKAKWLSVAEKALLK ANLQTDNQGKATRLSEVFLNPRVWLLVLILLTFNTGFYGLAFWMPSIIKSTGITNSLHIGLLTAIPYSVAVVAMLLNARH SNRTGERRLHAAIPAFIGGAGLILSAFFADNLVLSVLFLSVSASGILSLMPIFWTLPGTVLSGVAAAAGIGMINAIGNLS GFTGSMITAVAETLTGNINNGTYVLALCLLVSGGLILAIPASMLGRTPKHATTAAQLETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-85 | 47 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-85 | 47 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-85 | 47 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-85 | 47 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 5e-85 | 47 |
