Gene Information

Name : PSEBR_a2013 (PSEBR_a2013)
Accession : YP_004353258.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 2464776 - 2465666 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
TTGGAACTTCGTCATTTGCGTGGATTCATCGCTGTTGCAGAAGAGCTTCACTTCGCGCGCGCTGCAGAACGGCTGCATAT
CGAACAATCACCCCTGTCCAGAACCATCAAGGAACTCGAGTCGGACATCGGTGCGCAGCTATTTGACAGGAATTCGCGAG
GTACTAGATTAACCCATCCAGGCCAAGTACTCGCTGAAGCTGCCCAACGAATATTCCAAGCGGTAGAACAAGCGCGGTGC
AACGTACGCGCCGCAGCTGCGGGTTATCGAGGAACGCTTCGAATTGCACTATCCGATGGTGTCCTACCCCAGCGTTTGTC
AGCAGTTCTAGCGCGCTGTCGCGAAGAGGAACCGGAGGTAGAGATACGTTTGTTTGAGGTCTCGCTATCCCAGCAACTGA
GGGGACTTCGCGAGGACCTCTTCGACGTGGGCTTCGCCCGTTCGAAGGATGTAGGTGAAGGCTTAACAGCCCAAGCGGTG
TGGCAAATGCCTTTGGCTGTTGCTGTGCCTGCACGTCATCCGCTTCTGGCTCACAAGCAGATCCAGTTGGCAGAGGCGTT
GAACTATCCCTTGGTGCTGTTCCATCCCCAAACCCATCGCGGACTCCATCAACAAATGGACAGTCTTCTTCGACAGGTGC
CTACGTCGCCAACCATCGTCGAACACGTATCCAGTCACGAAGTTATGTTTTCCCTTGTCGCCGCCGGCTATGGAATAGGG
TTGACCTGTGAAGCGCAGATGGCGCTATGTCAAAGCAACGACGTCGTAAGCCGGCCGCTGGCAGACGATTCATCGATGCT
CACCAGCTACCTGCTTCGCTCTACAACTCCATCTGGAGAGCAACTCAGGCGATTCATCGAACGAGCGACGGATCTCGATT
TGCCAGGGTGA

Protein sequence :
MELRHLRGFIAVAEELHFARAAERLHIEQSPLSRTIKELESDIGAQLFDRNSRGTRLTHPGQVLAEAAQRIFQAVEQARC
NVRAAAAGYRGTLRIALSDGVLPQRLSAVLARCREEEPEVEIRLFEVSLSQQLRGLREDLFDVGFARSKDVGEGLTAQAV
WQMPLAVAVPARHPLLAHKQIQLAEALNYPLVLFHPQTHRGLHQQMDSLLRQVPTSPTIVEHVSSHEVMFSLVAAGYGIG
LTCEAQMALCQSNDVVSRPLADDSSMLTSYLLRSTTPSGEQLRRFIERATDLDLPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 3e-73 56
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 4e-54 44