Gene Information

Name : PSEBR_cmegl44 (PSEBR_cmegl44)
Accession : YP_004353253.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2460021 - 2461166 bp
Length : 1146 bp
Strand : -
Note : -

DNA sequence :
ATGAGTCGCACAGCTCCTGCTTCGCTGTCCTCCTTACTGGATGATGCATTAGAGCGCCTGCAGTCGCAGAATAAGCAGCC
CAGTGGGGATGGTTTTCTCTTTAGTGGTAATTGCCACCAGACGGTGCCCAGGGCGCTCCTGCTTGATCCTCGTCTTACAC
CTCTGGAGCGCAACGCCTGGCAAGTATTTCTGCTTCTGCTCAATGAGGATGGGGTCAGCGCTTTTCCAACCTACGACCAA
CTGCGCCGCTACTTGACCTCGGCTCCCTGTGGCAAGGTGGCGTCTCATGAAACCGTCGCCAAAGCGCTGACCATGCTGCG
TCTGACACGATGGCTTAGCTTGGTCAGGCGCCGGCGCGACAAGAGCACAGGGCGAGTGCTTGGCAACCTATATGTTCTTC
ATGACACCCCTCTGAGCCCTTTTGAAGCAATGCAGCTGGATCCGACCTACATGGGTTTGGTCAGTCAGACGTTGGAACAC
GCCAATAAGGGCATCCAGACAGTCGCTTTGTCAGTGCTCGAGGAAATGAGTCAGGACCCGCATGTGCAGACGCAGTTACT
CCCCAGTCGGCTGCAGGTGCTGACCCAACGTTTACTTGAACCACAAAGCTTGAGTGATGAGCCGTTTGTTTCATCCGAAG
AGCTCTCCAGCCCCACTCTTCGGAACAAAAAATCACCGGCTTCGGAATCCGAACCAGGCGTCAAACCCAATGATCACTAC
GGCCTTCGAAATCCGAAGACAGCACGTAGTTTAAGTACAAAAGCGTTAAAAGACGTACATACGCAATCACGACCGGATGG
TGCGTGTGAACTGAAACTCCCGCCTCAGTTCGGCGCGCTAAAACCGGCTCAGCAAACAGGTGCCAGAGTCGCTTTGCTAC
AACTGGATCCCGACCTACGTCAGGCGGTGCTTGACGAGTGGGCGGCGCGTTGTCGAAAAACACATGTTCGTAACCCCGCA
GGTTATCTGTTCGGCATCATCCAGAAAGCCATACACGGACAATTTACCGCTTTGGCGTCTAAAACGAGTTCGTGCACATC
GCCACTTACCTGTGAAACGCCCAAGCAGGAAACAAAGGCCGAACGAGATCCGGCCGTTGCATTGGCCTGCCTCGCGGAGC
TCAAAGGACTGCTTCACCTGCGCTGA

Protein sequence :
MSRTAPASLSSLLDDALERLQSQNKQPSGDGFLFSGNCHQTVPRALLLDPRLTPLERNAWQVFLLLLNEDGVSAFPTYDQ
LRRYLTSAPCGKVASHETVAKALTMLRLTRWLSLVRRRRDKSTGRVLGNLYVLHDTPLSPFEAMQLDPTYMGLVSQTLEH
ANKGIQTVALSVLEEMSQDPHVQTQLLPSRLQVLTQRLLEPQSLSDEPFVSSEELSSPTLRNKKSPASESEPGVKPNDHY
GLRNPKTARSLSTKALKDVHTQSRPDGACELKLPPQFGALKPAQQTGARVALLQLDPDLRQAVLDEWAARCRKTHVRNPA
GYLFGIIQKAIHGQFTALASKTSSCTSPLTCETPKQETKAERDPAVALACLAELKGLLHLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C105 AAN62198.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 4e-86 54
ORF SG100 AAN62321.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-84 53
pph09 CAI36050.1 hypothetical protein Not tested PPHGI-1 Protein 2e-57 44
RL100 AAP84225.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-52 41