Gene Information

Name : PSEBR_a2008 (PSEBR_a2008)
Accession : YP_004353251.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2458562 - 2459077 bp
Length : 516 bp
Strand : -
Note : -

DNA sequence :
ATGGGACTGCATTATTTCACTCCGCTTGAACAAAACGACTTTGAGCAACTGGCACATGTCGCCTACCTAAAAGGCCTTTT
CCAACCTTTTAAAGGTAAGGGGTGTTTGGAGCTCTGGGCCAGCCAATGCGTTGTGCTTCGCGATGAACTGATTGACCTAG
CGCAGCAACGCATACTCACGCAGACCCGGCGCTACCCCTTCAACCTGCTTCCAGCCCAACTGGCCCAGCAACCCACTGGT
GCAGGGACGACTTTTCTACGCTGGCGCAACCCTGATCACTCATCCATGGGCGTCGCGCTCTGGGAGAGATGCATGGAAAA
CGACGCCACTCCCAACCTGCTGATCGACGATCTGTTCGCCCTGGAGCAGCAGCGAATCGTATTAAACATGCAGATCAGCC
TGAGCCACACCCTCGCCCGCCAGGGTAATGATTGCGCCACCAAGTTGGCACAGGCCGAGGCGGTCTATCACCGTTGCGTC
ACCCGACGCGCCATCAACCAGGAGAGCACCTTGTGA

Protein sequence :
MGLHYFTPLEQNDFEQLAHVAYLKGLFQPFKGKGCLELWASQCVVLRDELIDLAQQRILTQTRRYPFNLLPAQLAQQPTG
AGTTFLRWRNPDHSSMGVALWERCMENDATPNLLIDDLFALEQQRIVLNMQISLSHTLARQGNDCATKLAQAEAVYHRCV
TRRAINQESTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG98 AAN62319.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-47 67
ORF C103 AAN62196.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-41 60
unnamed ABR13439.1 hypothetical protein Not tested PAGI-5 Protein 3e-36 53
RL096 AAP84221.1 conserved hypothetical protein Not tested PAPI-1 Protein 3e-33 49
pph11 CAI36052.1 hypothetical protein Not tested PPHGI-1 Protein 9e-37 48