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Name : PSEBR_a2007 (PSEBR_a2007) Accession : YP_004353249.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 2455860 - 2457875 bp Length : 2016 bp Strand : - Note : - DNA sequence : ATGCGACTTTTTCTCTGTGAGAAACCCTCCCAAGGCAAAGATATTGCCCGAGTGCTAGGTGCGCTTCGGCGTGGTAACGG CTGCTACAACGGTCCGGGCATCAGCGTGACCTGGTGCATCGGGCACCTGGTAGAAGCTGCTCCTCCTGAAGCCTACGACG AACGCTTCAAGCGCTGGTCCCTGGATCAGCTTCCCATCGTTCCGACTAACTGGCGCGTGGATGTCAAAGCGGACACGGCC GCCCAGTACAAGGTCGTCAAGCAGTTGTTGGCCAAGACGACTGAATTGGTGATTGCAACCGATGCCGATCGAGAGGGCGA AATGATTGCCCGAGAGATACTGGAATTGTGTCATTACCAAGGCTCGATCCGGCGATTATGGCTGTCAGCGCTCAACGAGG CATCGATTCGTAAAGCACTCACTGGTTTGCGTCCGGCCGATGAAACCGAACGGCTGTATCACTCCGCCCTCGCCCGCTCC CGGGCGGACTGGTTGGTCGGTATGAACATGAGTCGGTTATTTACGCTACTGGCACAACGAAGCGGCCATCATGGCGTGCT TTCAGTAGGACGCGTGCAAACGCCAACGTTACGGTTGGTCGTTGACCGCGATCGTGAAATCGAACGGTTTGTACCGATGC ATTACTGGGGTATCGATGTGCACCTGTCATACCAAGAGCAGCTATTTCTAGCCCAGTGGGTGGCTCCGGATTGTGCTACT GACGATGCAGGTCGTTGTATTCGACAGGCCATGGCTCAGCAGGCACTTCAAAGTGTACGACAAGCCCAGCGGGCACAGGT CCTCGACATGCAGATGGACCGCATACGAGAGGCTCCACCTCTGCCCTTCGATCTAGGGACGCTACAAGAGGTTTGCTCAC GGCGATTCGGGCTGGGTGTGCAGCAGACGCTGGAGATCGCGCAATCGCTGTACGAGACCCACAAGGCCACCACCTATCCG CGCTCCGATTCGGGATATCTTCCCGAAAGCATGTGGGATGAGGCATCGACCGTCCTTGATGCCTTGATTATCAGCGACCC AAGTGTGGAGGCGCTGGTTCAGTCTGTTAATCGACAGCAGCGCTCACGGGCCTGGAATGACAGCAAGGTCAGCGCTCACC ACGGCATCATCCCAACGTTGGAGCCGTTCCAAATCGAGGCCCTGAGTGAGAAGGAGCGGGCTGTATATGAACTGATCCGA GCCCATTACCTGGCTCAGTTTCTGCCGCACCATGAGTACGACCGTAGCTGCGCACTGTTCACCTGTGGCGGCCATACGCT GCGAGCCCACGGAAAACAAATCGTAGCGTCAGGCTGGCATCGGGCATTAGCGCCAGATTCTACGACGAGCGACGACGATT CGGCTCAACGAAACCAGATATTGCCGCCGCTGAGCACTGGTAGTGACTGCAATGTGAGCCAGGTGGAATTGAGAACACTC AAGACGCAAGCACCAAAAGCGCTCACCCAAGGCGAACTGATCAAGGCTATGAAAGGAGTCGCCAAACTTGTCACCGACCC TCGGCTCAAGCGAACGCTTAAAGAGACGACGGGGATCGGTACCGAAGCAACCCGCGCCAATATCATCAGCGGGTTGTTGA ACCGAGGTTACTTGTACATGAAGGGTCGCTCCGTACGGGCATCTGACGCCGCTTTTACCTTGATCGATGCGGTGCCCGCT GCCATTGCCGATCCTGCCACCACCGCGATCTGGGAGCAGGCTTTCGACATGATCGAGAACGGCCAAATGACTTTGGACTG TTTCATTGCCAAGCAAACAGCGTGGATCACCCAGTTGGTGGAGCATTATAGGACGACGACTTTGCTGATCCATACACCTG GTGGTCCGAACTGTCCCTTGTGCGGTGCATCGATGCGCCAACGCCAAGGCAAGCACGGTTCGTTCTGGTCGTGCAGCCGC TACCCCGAATGTAAGGGCGCGCTACCCGTCGTCACCAAGACAACGTTGGCGCCCCGACGTAGAAAGCCACGTCACTCAAA ACCCAAAGGGTACTGA Protein sequence : MRLFLCEKPSQGKDIARVLGALRRGNGCYNGPGISVTWCIGHLVEAAPPEAYDERFKRWSLDQLPIVPTNWRVDVKADTA AQYKVVKQLLAKTTELVIATDADREGEMIAREILELCHYQGSIRRLWLSALNEASIRKALTGLRPADETERLYHSALARS RADWLVGMNMSRLFTLLAQRSGHHGVLSVGRVQTPTLRLVVDRDREIERFVPMHYWGIDVHLSYQEQLFLAQWVAPDCAT DDAGRCIRQAMAQQALQSVRQAQRAQVLDMQMDRIREAPPLPFDLGTLQEVCSRRFGLGVQQTLEIAQSLYETHKATTYP RSDSGYLPESMWDEASTVLDALIISDPSVEALVQSVNRQQRSRAWNDSKVSAHHGIIPTLEPFQIEALSEKERAVYELIR AHYLAQFLPHHEYDRSCALFTCGGHTLRAHGKQIVASGWHRALAPDSTTSDDDSAQRNQILPPLSTGSDCNVSQVELRTL KTQAPKALTQGELIKAMKGVAKLVTDPRLKRTLKETTGIGTEATRANIISGLLNRGYLYMKGRSVRASDAAFTLIDAVPA AIADPATTAIWEQAFDMIENGQMTLDCFIAKQTAWITQLVEHYRTTTLLIHTPGGPNCPLCGASMRQRQGKHGSFWSCSR YPECKGALPVVTKTTLAPRRRKPRHSKPKGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 69 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 68 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-151 | 49 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-158 | 48 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-158 | 48 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-158 | 48 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 9e-150 | 48 |
