Gene Information

Name : PSEBR_a2000 (PSEBR_a2000)
Accession : YP_004353240.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2448034 - 2448783 bp
Length : 750 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGATCCCGCTGCGACAAGTCAACGTCAGCAGGCGCAACAGCAAGGGCTGTTCATCAGTCTGCTGACACTCCCCTT
TCGATTGATCGGCGTACTGTGCGGGTCGCTGATACTTAGCATTGCGATCGAATGCGCCGGCATGTACTTCTTCTGGCCCG
AGGAAGGCTGGTACCACTCGCGACGGATGTTTGAGTTTGAACTGGCCCAAATGTCTAAAGACTTCACCCGAAGCGCGCTG
GTGCAGGAGCCCGGACGTACCGCCCAAGCACTCGTCTTGAAGGTACATGAGATAGTGCTGGTCAAAACCGGCATTGCTGA
CTCACTGCAGGACACATCGAACAAAGCGAGGAACGCTCAGAATGATCGTGTTCACTCCGGTCGTTACTACCTTGGAACAA
TCTACACGTACCTGGAAAACGGCTTGATCGCCGTGGCATATACCGTGTTGGTGTTCATTGTCCGCTTGCTGGTGCTGGTT
CTGACGCTACCGCTATTCGTGACGACTGCCTTTGTAGGGTTGGTAGATGGACTGGTCTGTAGGGACATCAGGCGGTTTGG
CGCAGGGCGTGAGTCGGGCTACATTTACCATCGAGCCAAGGCTTGTGTAATACCGCTGATTATATGGCCCTGGATACTCT
ATCTGGCCTTACCGGTGAGCTTGGATGCAGTTTTGATCCTGCTTCCCAGCGCGGCTCTTTTGGGTATCGTGGTAGCTCTT
ACGGCAAGCAGGTTCAAAAAATACTTATGA

Protein sequence :
MSDPAATSQRQQAQQQGLFISLLTLPFRLIGVLCGSLILSIAIECAGMYFFWPEEGWYHSRRMFEFELAQMSKDFTRSAL
VQEPGRTAQALVLKVHEIVLVKTGIADSLQDTSNKARNAQNDRVHSGRYYLGTIYTYLENGLIAVAYTVLVFIVRLLVLV
LTLPLFVTTAFVGLVDGLVCRDIRRFGAGRESGYIYHRAKACVIPLIIWPWILYLALPVSLDAVLILLPSAALLGIVVAL
TASRFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-53 60
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 7e-53 57
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 2e-37 54
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-32 51
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-35 47
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-35 47
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 4e-35 47