Gene Information

Name : PSEBR_cmegl42 (PSEBR_cmegl42)
Accession : YP_004353231.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2442607 - 2443032 bp
Length : 426 bp
Strand : -
Note : -

DNA sequence :
ATGTCGTCTCGGATTTGGACTGAAATGATACCGGTCGCGCTACTCGCCGCGGCAGTAACGGGCTGTGCGACTAACACCGA
AGAGCTGCTCAGTCATAACGGCAATTCCATGATGGATGTCTGGAACCAACAAACCAGCGGATCACGGAGCGGACAAGCCG
CTCAACAGCTACTGGACGCAAGGCAGGCGTTGAGACGACCTCTGACTGAACCATTGCGGTCCTCTTCTGCCATGCCTTAC
ACCCGAACAGCTCAAATCGAGATCCGTCAGCAGTTTCATCGTCTGCCCAATCCGGACTTGGTGATGTACGTCTTTCCTCA
TTGGGCCGGGACAGAGTCCGTACCTGTACCAGGTTACAGCACCATTTTTCCGCTGCATCAACGCGTGCAGTACGCCATGC
CTGGCGAACGTTTGGAGGACTATTGA

Protein sequence :
MSSRIWTEMIPVALLAAAVTGCATNTEELLSHNGNSMMDVWNQQTSGSRSGQAAQQLLDARQALRRPLTEPLRSSSAMPY
TRTAQIEIRQQFHRLPNPDLVMYVFPHWAGTESVPVPGYSTIFPLHQRVQYAMPGERLEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 6e-30 57
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 1e-22 54
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-26 52
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-26 52
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-27 51
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-26 49
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 6e-19 45
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 1e-21 44