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Name : PSEBR_a1993 (PSEBR_a1993) Accession : YP_004353224.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2433361 - 2434770 bp Length : 1410 bp Strand : - Note : - DNA sequence : ATGAGCGCCCGCTATCCGTACGTCTCGACCTCGCCTCGATTTACCAATACCCGACGTCTACTTTCCGCCCTGCTTCTCTT GGCCACAGCTTCCCAGGCAGCGCAAACAGAACTGAACAAGGACGGCATCCATCACAGCGGTTCGATCGGTGACGACGTGC TCTATAGCATCGGTGGCGGACGCGCTGTGTCCATGGGTGGGTCTGCCGCCATGGACAGCATTTCGGTAGGTGCCGGCTGG GATACCAATTTGATCTGTGGCGACATGAGCCTCGACACCACGCTGCGAAACCAACTTAACGGTGCCACAGGCGGCTTCAA GTCGATCATGAGCAACATCATCCAGAACGCCACCAGCGCTGTAGCCTCCCTTCCCGCTCTGATCATTCAGCGCGCCGATC CAGGCCTGTACAACCTACTCACCAATGGCATATTGCAAGCCCGGCTTGATTTCGACCGATCCAAATCTACGTGTCGGGCC GTGGCCGAACGCATGGCCGATGTTGCGGGTGGTCAGCTCGGTTGGGGAGCACTGGCCGAAGGTATGGCGCTCAGTCATAC CGTCAAAAACCATGATGCTGTGGCAGCTGTTGAACAGGCGGAGCAGCATCGAGGCAACAACGGTGTACCTTGGGTCGGCG GCAATTCGGCCGGGGGCAAGAGACAACCCCCCATCAAAGTGGTTTCGGATGTCACACGCGCCGGCTTCAATTTGCTCAAT GGCCGTGATGTCGGCAATCGTTCCCCCATACCGAAAGATAGCTGCGGCAACCGTCTGAGCTGTCAGACATGGTCCTCCCC GCAAGAAGCAGAAGCCTGGGCTACTCGTGTACTGGGAGAGCAAGAGCACCAGACCTGCGACCACTGCACCAAAACACAAA CCAAACCTGGCGTGGGCCTTACTCCGCTCATTCAGGAGGAGTACGACGCCAAGCTTCAATCCCTTGAGGCCCTCGTGAAA GGCAGCAAACCCACCTCAGCGGAAAATCTGTTGGCGGCGAGCAGTCAATCACTCCCCATCACCCGGGGCGTGATAGAAGC ACTGCGCGATGAACCGGACCAAGACTTACTGGCAAGACGCTTGGCATCCGAGGTGGCGCTCTCCAGTGTCTTGGAAAAAG CACTCATGTTGCAGCGCACCCTGTTGACCGGACGCAAGGAACCCAACGTTGCTGCCAATCAACTGGCTCAACAAGCCATC ACCAGCGAAAGCGAAGCCCTGACTCAGGAAATCAACAGCCTCAAAACCGAACTCGAACTTCGGCGCACCCTGGCCGGCAG CTCACCAATGATGTTGATCCAACGTCAAAGCAATCGCGCCGCGGGATCACGTGGCGTCTACCAGGGCGATCCAATACGCA ACCGTCTGGACCTGATCCAGCAGCCGGTGCCTGAGGGCCACCGACCATGA Protein sequence : MSARYPYVSTSPRFTNTRRLLSALLLLATASQAAQTELNKDGIHHSGSIGDDVLYSIGGGRAVSMGGSAAMDSISVGAGW DTNLICGDMSLDTTLRNQLNGATGGFKSIMSNIIQNATSAVASLPALIIQRADPGLYNLLTNGILQARLDFDRSKSTCRA VAERMADVAGGQLGWGALAEGMALSHTVKNHDAVAAVEQAEQHRGNNGVPWVGGNSAGGKRQPPIKVVSDVTRAGFNLLN GRDVGNRSPIPKDSCGNRLSCQTWSSPQEAEAWATRVLGEQEHQTCDHCTKTQTKPGVGLTPLIQEEYDAKLQSLEALVK GSKPTSAENLLAASSQSLPITRGVIEALRDEPDQDLLARRLASEVALSSVLEKALMLQRTLLTGRKEPNVAANQLAQQAI TSESEALTQEINSLKTELELRRTLAGSSPMMLIQRQSNRAAGSRGVYQGDPIRNRLDLIQQPVPEGHRP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-141 | 72 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 2e-145 | 70 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 8e-131 | 63 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-128 | 63 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 2e-138 | 62 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 2e-130 | 62 |
