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Name : PSEBR_a1992 (PSEBR_a1992) Accession : YP_004353222.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2431509 - 2433014 bp Length : 1506 bp Strand : - Note : - DNA sequence : ATGACGCTCTACACCAACGACTATCTGGAGTACTACCTGACCCTGGTCGGGTGGATCGTCAACAACGGCATCTGGGAGCT GCTCGTTGCCAGCGGCGTATTTACCCTGCCCTTCCTTGCCATCATCATCCAGGAATGGCTCAGGGCACGAAGTGAAGGTG CCGATGAGGGCAACAAGGGCCTCCTGTCCTCCTTGCGCATCGAGAACCGAGTGTGGGTCGCTATTGTCGTAATCATGTTT GCGGGTATTCCCTTCTTTCCGGTGGACCTGAACACGATCGAGTTCGACAGTACTCGCTCAACGCAATGTCAGGTCAGCGT CGCCGCTCCGCAAGACACTCGCTGGTCCAGCACCTTTACCACCCTCAATAACCAAAGCGCCAAAGTGCCGGTGTGGTGGT TCTTCATGCACTCGCTTTCAAAAGCCATCACCGGTGGATCTATTGCGGCAATCCCCTGTGGAACAGATCTGCGGCAGATT CGCATGGACATTGACGCAACACGCATCGACGACCCGATATTGGCTCAGGAGGTCGTTGATTTCAGCCAAGACTGCTACGG CCCGGCACGCGCGCGAATGTTCATGAATCGTCCGAGCCTGAGCGACGAGAAGATGGACGACATCAATTGGATTGGGTCGA AGCAGTTGGTCAGCACCAGTGGATACTACGATCGATATCACTCCAAAACCCCTCGCAGCCGTTGGCCTTTCAATACTGCG CGAGATGCAGGACTGGCCCAGGTTCCTGGTGGCGGCGGTTACCCCACGTGCAAGCAATGGTGGTCAGATGCAGGTGTTGG TTTGCGAGCCAGGCTGGTGCAGCAGATCGATCCAAGCCTGCTAACTCGCCTCAGCAACTGGGCACGCTTCCTGAGCAGAA CTGAGTCCGATGACGCAGTCATTCGATCCGTCGTATCACCGCGCCAACAGACATTGAACCAAGGCCAGGTCTACTCCAGC TACGGAGGCCAGATCGACATGTCTGCCTCGAACATGCTTGCTCGCGGAGCCTCAGATTTGGGCATGACGGTCGGCTCACT GGCCTTCTTCCCTGGGATGGACGTAGTACGCCAAGCCCTTCCCATGGTGCTGTCCTTTTTGAAGGCTGCGCTGATCATTT GCATTCCCTTGATCTTGGTGATCGGGACCTACGAACTCAAAGCCTTGGTTACCATAAGCTGTGTCCAGTTCGCTCTCTTC TTCGTGGACTTCTGGTTTCAACTCGCTCGCTGGCTCGACAGCACGATCCTTGAAGCGCTGTACGGCTGGAACTCCCCCCA TAGCAATTTCAACGTGCTCATGGGCATCAACAACTCCTTTGGGGACATGCTGCTGAACTACGTCATGGCGACAATGTTTT TAATCCTCCCCACATTATGGATTTCCGCACTGTCCTGGGTCGGAATGCGAGCAGGAGGAGTAATTCAAGGTTTGAGTCAA GGTGGTTCAGACGCTCAAGCGGCAGGGGCCAGAGGTGCCGATATAGCCAAGAGAATGATCCTGTAA Protein sequence : MTLYTNDYLEYYLTLVGWIVNNGIWELLVASGVFTLPFLAIIIQEWLRARSEGADEGNKGLLSSLRIENRVWVAIVVIMF AGIPFFPVDLNTIEFDSTRSTQCQVSVAAPQDTRWSSTFTTLNNQSAKVPVWWFFMHSLSKAITGGSIAAIPCGTDLRQI RMDIDATRIDDPILAQEVVDFSQDCYGPARARMFMNRPSLSDEKMDDINWIGSKQLVSTSGYYDRYHSKTPRSRWPFNTA RDAGLAQVPGGGGYPTCKQWWSDAGVGLRARLVQQIDPSLLTRLSNWARFLSRTESDDAVIRSVVSPRQQTLNQGQVYSS YGGQIDMSASNMLARGASDLGMTVGSLAFFPGMDVVRQALPMVLSFLKAALIICIPLILVIGTYELKALVTISCVQFALF FVDFWFQLARWLDSTILEALYGWNSPHSNFNVLMGINNSFGDMLLNYVMATMFLILPTLWISALSWVGMRAGGVIQGLSQ GGSDAQAAGARGADIAKRMIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C40 | AAN62133.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-176 | 69 |
| ORF SG48 | AAN62270.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 9e-175 | 68 |
| RL014 | AAP84141.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 8e-143 | 58 |
| EXA17 | ABD94626.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 3e-143 | 58 |
| pph92 | CAI36133.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 5e-147 | 58 |
| unnamed | ABR13354.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-142 | 57 |
| STY4579 | NP_458664.1 | putative membrane protein | Not tested | SPI-7 | Protein | 7e-96 | 45 |
| t4276 | NP_807874.1 | hypothetical protein | Not tested | SPI-7 | Protein | 7e-96 | 45 |
| PMI2570 | YP_002152289.1 | hypothetical protein | Not tested | Not named | Protein | 8e-88 | 42 |
