Gene Information

Name : PSEBR_a1991 (PSEBR_a1991)
Accession : YP_004353221.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2429114 - 2430931 bp
Length : 1818 bp
Strand : -
Note : -

DNA sequence :
ATGCTCTCGCTGTTTCGTCGCAAGCAGCAGTCAACCCAACTTGAGAGCTCTCCAGCAGAGGAGACTTCATCACAGGGATT
GACCGCTCCACAGTCAGCCCAAGCCTTGCTCGCAGAGCCACGCCGACAAAAGCTGTTGGACCACATTTGGCAACGAACAG
CCCTCTCCCGTCCCCAGTTCAACCAACTTTACCTGGATCCCATCAAGCGCTACGCCGAACTTGTACAGCTTCTCCCCGCA
TCAGAGAGTCACCACCACGCATACCCCGGCGGAATGCTCGACCACGGCCTAGAGGTCGTTGCCTACGCCCTGAAGCTTCG
CCAGTCCCACCTCCTCCCCTCCGGAACTCAACCGGAAATACAGATCGCCCAGGCAGAAGCCTGGACGGCCGGCATTGCCT
ATGGCGCTCTCGCACATGACCTCGGAAAAATTGGTGTAGATCTGCACGTCGAATATGCAGACGGCACAGTCTGGCATCCC
TGGCACGGCCCGATCGCACGCCCCTACCGCCTGCGCTATCGAAAGGACCGACAATATCGTTTACACGGCGCGGCAGGAGG
CATGCTCATCTGCCAGCTCCTGAATCGAGACATACTGGATTGGCTCTGCACATTTCCAGAGCTCTGGGCCTCGCTGATCT
ACAACCTGGCAGGCCAGTATGAGCACGCAGGAGAGCTAGGCTCACTCGTCATGCAAGCTGACCAAGCTTCGGTAGCCCAA
GCGCTTGGAGGCGATCCTGGGAAAGCCCTGACAGCACCCAAACACGCGCTGCAGCGAAAGCTGTTGGAAGGACTACGTTA
CCTTCTCAGTGAGGAACTCAAGCTAAACCAAGCTCAAGCGTCTGATGGCTGGCTCACCCACGATGCTCTTTGGCTAGTCA
GTAAAACAGTCTCGGATAAATTGCGCGCTCACCTGCTGTCCCAAGGCATCGAAGGCATTCCGGAGAAAAACACGGCGGTC
TTCAACGTCTTGCAAGATCACGGAATCGTTCTGCCCAGTGCTGACGGCAAAGCCATCTGGAAAGCCACCATCAACAGCGA
AAACGGTTGGACCCACAGCTTCACCTTCTTGAAACTTTCGCCCGCCTTGATCTGGGAGGCAGGAGCACGACCCGAGGTAT
TTGGCGGCTCGGTTACCGTCAACATCGTCGATCCACCAACCAGCCCCTTAGGAAAGCTCGATACAACCTTAACTACCCCG
CCAACGACCGGAAACAAACCAGATCCGGTTCATTCGATAACGTCCGCGCCGCCACCCTCACCACCTGATTCAGTCGACAT
GCTGATGGATCTGTTCGGCCCTCCTCCTGCCTATCTGGATGAGCCTAACTTCATCGATGAGGCCGAACAGCTCACCGCTG
AGATACAAGCTTCACCGGCAGCAACCGACCCTTCTGGCGAGCACTTCATGCAGTGGTTTACCCAAGGCGTTCAGACACAC
CGCATCATCATGAATGACACCAGAGCTCTCGTGCATAGCGTCAATGACACACTGTACCTTGTCTCTCCTGGGATTTTCCG
CCGCTACAGCCAGGAGCACCCATGCCTGGCTCGAATCGCAAAACAGGAAAATATCTCCGACTGGCAATGGATACAGAAAC
GCTTCGAACAAATGAAACTGCACCGCAAACAACCCAACGGACTCAACATCTGGACCTGCGAAGTGACCGGGCCACGCAAG
ACCCGGCGACTACACGGCTACTTGCTCAAATCACCGGCCGGGCTCATGAACGATCTTGCTCTGAACAATCCTTACTTGAA
GGTCATAACGCCGAGCAGCACTCAGGAGTCGCCCCAAACTTTAGGAAACACCCGGTAA

Protein sequence :
MLSLFRRKQQSTQLESSPAEETSSQGLTAPQSAQALLAEPRRQKLLDHIWQRTALSRPQFNQLYLDPIKRYAELVQLLPA
SESHHHAYPGGMLDHGLEVVAYALKLRQSHLLPSGTQPEIQIAQAEAWTAGIAYGALAHDLGKIGVDLHVEYADGTVWHP
WHGPIARPYRLRYRKDRQYRLHGAAGGMLICQLLNRDILDWLCTFPELWASLIYNLAGQYEHAGELGSLVMQADQASVAQ
ALGGDPGKALTAPKHALQRKLLEGLRYLLSEELKLNQAQASDGWLTHDALWLVSKTVSDKLRAHLLSQGIEGIPEKNTAV
FNVLQDHGIVLPSADGKAIWKATINSENGWTHSFTFLKLSPALIWEAGARPEVFGGSVTVNIVDPPTSPLGKLDTTLTTP
PTTGNKPDPVHSITSAPPPSPPDSVDMLMDLFGPPPAYLDEPNFIDEAEQLTAEIQASPAATDPSGEHFMQWFTQGVQTH
RIIMNDTRALVHSVNDTLYLVSPGIFRRYSQEHPCLARIAKQENISDWQWIQKRFEQMKLHRKQPNGLNIWTCEVTGPRK
TRRLHGYLLKSPAGLMNDLALNNPYLKVITPSSTQESPQTLGNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-175 59
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-171 58
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 4e-135 47