Gene Information

Name : PSEBR_a1984 (PSEBR_a1984)
Accession : YP_004353212.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Virulence
Product : NarL family response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2420329 - 2420970 bp
Length : 642 bp
Strand : +
Note : -

DNA sequence : 
TTGATTAGGGTGTTAGTGGTCGATGACCATGATCTCGTCCGTACGGGCATTACACGAATGCTGGCTGACATCGACGGCCT
GCAGGTAGTTGGCCAGGCTGAATCCGGGGAAGAATCCCTGATCAAGGCGCGCGAATTGAAGCCCGACGTGGTGTTGATGG
ACGTCAAGATGCCTGGCATCGGCGGCCTTGAGGCCACGCGCAAGCTGCTGCGCAGTCACCCGGACATCAAGGTGGTCGCG
GTGACCGTGTGTGAAGAGGATCCGTTTCCCACCCGGCTGTTGCAGGCGGGCGCGGCGGGTTACCTCACCAAGGGTGCTGG
GTTGAACGAGATGGTCCAGGCCATTCGTCTGGTTTTTGCCGGGCAACGCTACATCAGCCCGCAAATCGCCCAGCAATTGG
CGATCAAGTCGTTCCAGCCAACCAACGATTCTCCCTTCGATGCACTGTCGGAGCGGGAAATCCAGATTGCGCTGATGATT
GTCGGTTGCCAGAAGGTGCAGATCATCTCCGACAAGCTGTGCCTGTCGCCAAAAACCGTCAACACTTACCGCTACCGTAT
CTTCGAGAAGCTTTCGATCAGCAGTGACGTCGAATTGACACTGTTGGCGGTGCGCCACGGCATGGTCGATGCCAGCGCCT
GA

Protein sequence : 
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLEATRKLLRSHPDIKVVA
VTVCEEDPFPTRLLQAGAAGYLTKGAGLNEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTNDSPFDALSEREIQIALMI
VGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELTLLAVRHGMVDASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-52 58
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-52 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a1984 YP_004353212.1 NarL family response regulator VFG1889 Protein 1e-51 55