Gene Information

Name : PSEBR_a1906 (PSEBR_a1906)
Accession : YP_004353131.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : 3-oxoacid CoA-transferase subunit A
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1788
EC number : -
Position : 2327299 - 2327997 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence :
ATGGCAGGTTTCGACAAACGCGTGAGCTCTTATGAGGAAGCGCTGGAAGGCTTGAAGGACGGCATGACCGTCATCGCCGG
CGGCTTCGGCCTGTGCGGGATCCCGGAAAACCTGATCGCCGAGATCAAGCGCAAGGGCATCCGCGACCTCACCGTAGTGT
CCAATAACTGCGGCGTCGACGGCTTCGGCCTCGGCGTGCTGCTGGAAGACCGGCAGATCCGCAAGGTGGTCGCCTCCTAC
GTGGGCGAAAACGCCCTGTTCGAGAAGCAACTGCTCAGCGGTGAAATCGAAGTCGTACTTACCCCCCAAGGCACCCTCGC
GGAAAAAATGCGCGCCGGCGGCGCAGGCATCCCGGCGTTCTTCACCGCCACCGGCGTCGGCACCCCGGTGGCCGAAGGCA
AGGAAGTGCGTGAATTCCATGGTCGCCAGTACCTGATGGAAGAATCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGG
AAGGCCGATCATTTCGGCAACGTGATCTATCGCCACACCGCCCAGAACTTCAATCCACTGGCCGCCACGGCGGGCAAGAT
CACGGTGGTGGAAGTCGAAGAAATCGTCGAACCCGGCGAGCTGGACCCGACGCAGATCCACACCCCTGGCATCTACGTCG
ACCGGGTCATTTGCGGCACGTTCGAAAAACGCATCGAACAGCGCACCGTGCGTAAGTGA

Protein sequence :
MAGFDKRVSSYEEALEGLKDGMTVIAGGFGLCGIPENLIAEIKRKGIRDLTVVSNNCGVDGFGLGVLLEDRQIRKVVASY
VGENALFEKQLLSGEIEVVLTPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKEVREFHGRQYLMEESITGDFAIVKGW
KADHFGNVIYRHTAQNFNPLAATAGKITVVEVEEIVEPGELDPTQIHTPGIYVDRVICGTFEKRIEQRTVRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18070.1 unknown Not tested TTSS locus Protein 1e-31 41