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Name : PSEBR_a174 (PSEBR_a174) Accession : YP_004351311.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NAD(P)(+)) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 207339 - 208781 bp Length : 1443 bp Strand : + Note : - DNA sequence : ATGCAGCTTAAAGACACCCAGTTGTTCCGCCAACAAGCCTTTATCGATGGCGCTTGGGTCGATGCGGACAATGGTCAGAC GATCAAGGTCACCAACCCGGCAACGGGCGAAGTGCTGGGCACTGTGCCGAAAATGGGCGCCGCCGAAACCCGCCGGGCGA TTGAAGCCGCCGACAAGGCACTGCCGGCCTGGCGTGCACTGACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTAC GAATTGCTGATCGAAAACCAGGACGACCTCGGTCGCCTGATGACCCTGGAACAAGGCAAGCCACTGGCCGAAGCCAAGGG CGAAATCGTCTACGCCGCCTCGTTCATCGAATGGTTCGCCGAAGAAGCCAAGCGCATCTACGGTGACGTGATTCCCGGCC ACCAACCCGACAAACGCCTGATCGTGATCAAGCAGCCGATCGGCGTGACCGCAGCCATTACCCCGTGGAACTTCCCGGCC GCGATGATCACCCGCAAGGCCGGCCCGGCCCTGGCTGCCGGTTGCACCATGGTCATCAAGCCAGCTTCGCAAACCCCGTT CTCGGCCCTGGCCCTCGTGGAACTGGCGCACCGTGCCGGGATCCCGCAAGGCGTGCTGAGCGTGGTCACCGGTAGCGCCG GCGACATCGGTGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGTCGTTCACCGGTTCGACCGAGATCGGTCGCCAG TTGATGGCCGAATGTGCCAAGGACATCAAGAAAGTCTCCCTGGAACTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCGGACCTGGATAAGGCCGTCGAAGGCGCGATCATTTCCAAATACCGCAACAACGGCCAGACCTGCGTCTGCGCCAACC GCCTGTACATCCAGGATTCGGTGTACGACGCGTTTGCCGAAAAACTGAAAGTGGCGGTGGCCAAGCTCAAGATCGGCAAC GGCCTGGACGATGGCACCACCACCGGTCCCTTGATCGACGGCAAAGCGGTCGCCAAGGTGCAGGAACACATCGCTGATGC CGTCAGCAAAGGCGCGACCGTGCTGTCGGGCGGCAAGGCAATGGAAGGCAACTTCTTCGAGCCGACCATCCTGACCAACG TGCCGAAGAACGCTGCAGTGGCGAAAGAAGAAACCTTCGGCCCGCTGGCACCGCTGTTCCGTTTCAAAGACGAAGCCGAA GTGATCGCGATGTCCAACGACACCGAGTTCGGCCTGGCCTCGTACTTCTATGCTCGCGACCTGGGCCGTGTGTTCCGTGT GGCCGAAGCCCTGGAATACGGCATGGTCGGCGTCAACACCGGGTTGATTTCCAACGAAGTCGCGCCATTCGGCGGCATCA AGGCTTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAGGATTACCTGGAAATCAAATACCTCTGCCTGGGTATC TGA Protein sequence : MQLKDTQLFRQQAFIDGAWVDADNGQTIKVTNPATGEVLGTVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWY ELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVIKPASQTPFSALALVELAHRAGIPQGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKVAVAKLKIGN GLDDGTTTGPLIDGKAVAKVQEHIADAVSKGATVLSGGKAMEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAE VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-157 | 67 |
