Gene Information

Name : PSEBR_a1767 (PSEBR_a1767)
Accession : YP_004352982.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Resistance
Product : liporotein ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2167733 - 2168431 bp
Length : 699 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGAGTCGGGCATGAGTGAAAAAGCAATCTTGAGCTGCCGCAACCTGGGCAAATCCTACGAGGAAGGTCCGGAGTC
GGTGGTGGTGTTGTCGGGCCTGCAACTGGAGTTGCATCCTGGCGAGCGCGTGGCGATTGTCGGCACCTCCGGGTCGGGCA
AAAGTACCTTGCTCAACCTGCTGGGCGGCCTGGATACGCCGACCGCCGGCAGTGTCTGGCTGGCTGGCGAAGAACTTTCG
GCACTGAACGAGAAGGCCCGTGGCCTGTTGCGTAACCGTTCCCTGGGTTTCGTCTACCAATTCCACCATTTGCTGCCCGA
GTTCACCGCGCTGGAAAACGTCTGCATGCCGCTGTTGATCGGTCGCACGGCGATTCCTGAGGCCCGCCAGCGTGCCACGG
CGTTGCTGGAGCGGGTAGGGCTGGGGCATCGCCTGGAGCACAAGCCGGCCGAATTGTCCGGTGGTGAGCGCCAGCGCGTG
GCGATTGCCCGGGCCCTGGTCAACAAGCCTGGCCTGGTGATGCTTGATGAGCCGACCGGCAACCTCGACTCCCACACCGC
CCAAGGCATCCAGGATTTGATGCTGGAGCTCAGCACGTCGATGCGCACCGCGTTCCTGGTGGTGACCCACGACATGAACC
TGGCCCGGCAGATGGACCGCGTCCTGCACTTGCAGGAAGGTTGCCTGACGCCCATCTGA

Protein sequence : 
MSESGMSEKAILSCRNLGKSYEEGPESVVVLSGLQLELHPGERVAIVGTSGSGKSTLLNLLGGLDTPTAGSVWLAGEELS
ALNEKARGLLRNRSLGFVYQFHHLLPEFTALENVCMPLLIGRTAIPEARQRATALLERVGLGHRLEHKPAELSGGERQRV
AIARALVNKPGLVMLDEPTGNLDSHTAQGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLHLQEGCLTPI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a1767 YP_004352982.1 liporotein ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-39 43
PSEBR_a1767 YP_004352982.1 liporotein ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-32 43